SIRmcmc: Compartmental Susceptible-Infectious-Recovered (SIR) Model of Community and Household Infection

We build an Susceptible-Infectious-Recovered (SIR) model where the rate of infection is the sum of the household rate and the community rate. We estimate the posterior distribution of the parameters using the Metropolis algorithm. Further details may be found in: F Scott Dahlgren, Ivo M Foppa, Melissa S Stockwell, Celibell Y Vargas, Philip LaRussa, Carrie Reed (2021) "Household transmission of influenza A and B within a prospective cohort during the 2013-2014 and 2014-2015 seasons" <doi:10.1002/sim.9181>.

Getting started

Package details

AuthorF Scott Dahlgren and Ivo M Foppa
MaintainerF Scott Dahlgren <fdahlgr@gmail.com>
LicenseGPL (>= 2)
Version1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("SIRmcmc")

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SIRmcmc documentation built on Nov. 23, 2021, 9:09 a.m.