SLIDE: Single Cell Linkage by Distance Estimation is SLIDE

This statistical method uses the nearest neighbor algorithm to estimate absolute distances between single cells based on a chosen constellation of surface proteins, with these distances being a measure of the similarity between the two cells being compared. Based on Sen, N., Mukherjee, G., and Arvin, A.M. (2015) <DOI:10.1016/j.ymeth.2015.07.008>.

Package details

AuthorGourab Mukherjee [aut], Arjun Panda [aut, cre], Ann Arvin [aut], Adrish Sen [aut], Nandini Sen [aut]
MaintainerArjun Panda <>
Package repositoryView on CRAN
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SLIDE documentation built on May 1, 2019, 9:02 p.m.