get_sig_pathway: A function that returns significant pathways.
In SMAHP: Survival Mediation Analysis of High-Dimensional Proteogenomic Data
View source: R/get_sig_pathway.R
get_sig_pathway R Documentation
A function that returns significant pathways.
Description
A function that returns significant pathways.
Usage
get_sig_pathway(res_SMAHP)
Arguments
res_SMAHP
Outputs from SMAHP
Value
A data frame which includes the name of exposure and mediator with adjusted p-value from identified significant pathways.
Examples
data(example_dat)
surv_dat <- example_dat$surv_dat
res_SMAHP <- SMAHP(example_dat$X, example_dat$M, example_dat$C, time = surv_dat$time,
status = surv_dat$status)
get_sig_pathway(res_SMAHP)
SMAHP documentation built on April 4, 2025, 1:36 a.m.
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View source: R/get_sig_pathway.R
| get_sig_pathway | R Documentation |
A function that returns significant pathways.
Description
A function that returns significant pathways.
Usage
get_sig_pathway(res_SMAHP)
Arguments
res_SMAHP |
Outputs from SMAHP |
Value
A data frame which includes the name of exposure and mediator with adjusted p-value from identified significant pathways.
Examples
data(example_dat)
surv_dat <- example_dat$surv_dat
res_SMAHP <- SMAHP(example_dat$X, example_dat$M, example_dat$C, time = surv_dat$time,
status = surv_dat$status)
get_sig_pathway(res_SMAHP)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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