API for SMDIC
Identification of Somatic Mutation-Driven Immune Cells
| Global functions | |
|---|---|
| CIBERSORT | Source code |
| CoreAlg | Source code |
| GetExampleData | Man page Source code |
| Getenvir | Source code |
| SMDIC | Man page |
| SMDIC-package | Man page |
| cell24 | Man page |
| cell64 | Man page |
| cellmatrix | Man page |
| doPerm | Source code |
| envData | Man page |
| exp.example | Man page |
| exp2cell | Man page Source code |
| gene2cellsummary | Man page Source code |
| getCoefExpCluster | Source code |
| getCutoffValue | Source code |
| getKMdata | Source code |
| getPrintFile | Source code |
| getUniOrMultiCOXAnalysis | Source code |
| heatmapcell | Man page Source code |
| immunelist | Man page |
| initializeSMDIC | Source code |
| maf2matrix | Man page Source code |
| microenvironmentScores | Source code |
| mutcell | Man page |
| mutcellsummary | Man page Source code |
| mutcorcell | Man page Source code |
| mutmatrix | Man page |
| plotCoocMutex | Man page Source code |
| plotwaterfall | Man page Source code |
| rawEnrichmentAnalysis | Source code |
| spillOver | Source code |
| survcell | Man page Source code |
| transformScores | Source code |
| xCell.data | Man page |
| xCellAnalysis | Source code |
| xCellSignifcanceBetaDist | Source code |
| xCellSignifcanceRandomMatrix | Source code |
