SMVar-package: Structural Model for Variances

Description Details Author(s) References Examples

Description

Package containing moderated t-tests to detect differentially expressed genes for paired and unpaired data

Details

Package: SMVar
Type: Package
Version: 1.3.3
Date: 2011-08-03
License: GPL

SMVar.unpaired and SMVar.paired are the most important functions.

Author(s)

Guillemette Marot <[email protected]>

References

F. Jaffrezic, Marot, G., Degrelle, S., Hue, I. and Foulley, J. L. (2007) A structural mixed model for variances in differential gene expression studies. Genetical Research (89) 19:25

Examples

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library(SMVar)
data(ApoAIdata)
attach(ApoAIdata)
SMVar.unpaired(ApoAIGeneId,list(ApoAICond1,ApoAICond2))

Example output

[1] "8 differentially expressed gene(s)"
[1] "Warning: No file is given to save the results of the analysis"

SMVar documentation built on May 29, 2017, 9:36 a.m.