SNPMClust: Bivariate Gaussian Genotype Clustering and Calling for Illumina Microarrays

Share:

Bivariate Gaussian genotype clustering and calling for Illumina microarrays, building on the package 'mclust'. Pronounced snip-em-clust.

Author
Stephen W. Erickson and Joshua C. Callaway
Date of publication
2016-07-27 03:37:28
Maintainer
Joshua C. Callaway <joshcllw@gmail.com>
License
GPL (>= 2)
Version
1.3

View on CRAN

Man pages

generatepriors
Generate pseudodata for 'snpmclust'
prepdata
Prepares data for use with 'snpmclust'
snpmclust
Genotype clustering and calling
testset
De-identified test set

Files in this package

SNPMClust
SNPMClust/inst
SNPMClust/inst/CITATION
SNPMClust/NAMESPACE
SNPMClust/data
SNPMClust/data/testset.rda
SNPMClust/R
SNPMClust/R/snpmclust.R
SNPMClust/R/generatepriors.R
SNPMClust/R/prepdata.R
SNPMClust/MD5
SNPMClust/DESCRIPTION
SNPMClust/man
SNPMClust/man/testset.Rd
SNPMClust/man/generatepriors.Rd
SNPMClust/man/prepdata.Rd
SNPMClust/man/snpmclust.Rd