listDatabases: List population from human database (1000 Genomes project)
In SNPannotator: Investigating the Functional Characteristics of Selected SNPs and Their Vicinity Genomic Region
listDatabases R Documentation
List population from human database (1000 Genomes project)
Description
This function list the name, description and size of the available populations
in 1000 Genomes project database. This database will be used for returning variables in high LD
with the target SNP.
Usage
listDatabases(server)
Arguments
server
name of the server. "https://rest.ensembl.org" can be used for GRCh38
and "https://grch37.rest.ensembl.org" for GRCh37.
Value
A data table is returned which includes the name, description and size of the available populations
in 1000 Genomes project database.
SNPannotator documentation built on Jan. 12, 2023, 5:15 p.m.
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| listDatabases | R Documentation |
List population from human database (1000 Genomes project)
Description
This function list the name, description and size of the available populations in 1000 Genomes project database. This database will be used for returning variables in high LD with the target SNP.
Usage
listDatabases(server)
Arguments
server |
name of the server. "https://rest.ensembl.org" can be used for GRCh38 and "https://grch37.rest.ensembl.org" for GRCh37. |
Value
A data table is returned which includes the name, description and size of the available populations in 1000 Genomes project database.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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