Nothing
## guidance_testcases
test_that("guide_SOAs", {
## errors
expect_error(guide_SOAs(s=2, el=2, m=20, n=16),
regexp="m >= n is not permitted",
fixed=TRUE)
expect_error(guide_SOAs(s=3, el=3, n=9),
regexp="more levels than runs",
fixed=TRUE)
expect_error(guide_SOAs(s=2, el=3, n=9),
regexp="n is not a multiple of s^el",
fixed=TRUE)
expect_error(guide_SOAs(s=2.5, el=3, n=9),
regexp="s%%1 == 0 is not TRUE",
fixed=TRUE)
expect_error(guide_SOAs(s=2, el=3.2, n=9),
regexp="el%%1 == 0 is not TRUE",
fixed=TRUE)
expect_error(guide_SOAs(s=2, el=2, n=8.2),
regexp="n%%1 == 0 || is.null(n) is not TRUE",
fixed=TRUE)
expect_error(guide_SOAs(s=2, el=2, m=8.2),
regexp="m%%1 == 0 || is.null(m) is not TRUE",
fixed=TRUE)
expect_error(guide_SOAs(s=2, el=4),
regexp="el %in% 2:3 is not TRUE",
fixed=TRUE)
expect_error(guide_SOAs(s=3, el=2, n=9),
regexp="n < s^3 is not permitted",
fixed=TRUE)
## el=2
## s=2
temp1 <- guide_SOAs(s=2, el=2)
expect_snapshot_output(temp1)
temp2 <- guide_SOAs(s=2, el=2, n=32, m=21)
expect_snapshot_output(temp2)
## n only given, m=22 obtained for HCT and ZT
temp3 <- guide_SOAs(s=2, el=2, n=32)
expect_snapshot_output(temp3)
## m only given, n=32 for HCT, n=48 for ZT
temp4 <- guide_SOAs(s=2, el=2, m=20)
expect_snapshot_output(temp4)
## 64 runs
temp5 <- guide_SOAs(s=4, el=2, n=80)
expect_snapshot(temp5)
## n=256, m=45 (HCT) or m=21 (ZT)
temp6 <- guide_SOAs(s=4, el=2, n=256)
expect_snapshot(temp6)
temp7 <- guide_SOAs(s=4, el=2, m=15)
expect_snapshot_output(temp7)
## s=3
## m=6 (HCT) or m=4 (ZT)
temp8 <- guide_SOAs(s=3, el=2)
expect_snapshot_output(temp8)
temp9 <- guide_SOAs(s=3, el=2, n=27)
expect_snapshot_output(temp9)
## n=81 for HCT, n=243 for ZT
temp10 <- guide_SOAs(s=3, el=2, m=20)
expect_snapshot_output(temp10)
## n=81, m=25 (HCT) or m=13 (ZT)
temp11 <- guide_SOAs(s=3, el=2, n=81)
expect_snapshot_output(temp11)
## n=729, m=18 (HCT) or m=10 (ZT)
temp12 <- guide_SOAs(s=9, el=2, n=729)
expect_snapshot_output(temp12)
## n=512, mmax=16 (HCT) or n=512 mmax=9 (ZT)
temp13 <- guide_SOAs(s=8, el=2, m=8)
expect_snapshot_output(temp13)
## el=3
## s=2
temp14 <- guide_SOAs(s=2, el=3)
expect_snapshot_output(temp14)
temp15 <- guide_SOAs(s=2, el=3, n=32, m=12)
expect_snapshot_output(temp15)
## this is an exception for Shi and Tang's family 1
## m only 9 and not 10
temp16 <- guide_SOAs(s=2, el=3, n=32)
expect_snapshot_output(temp16)
temp17 <- guide_SOAs(s=2, el=3, m=20)
expect_snapshot_output(temp17)
## creates Shi and Tang family 2 (one too many for fam 3)
temp18 <- guide_SOAs(s=2, el=3, m=32)
expect_snapshot_output(temp18)
## n=256, m=20 LLY
temp19 <- guide_SOAs(s=4, el=3, n=256)
expect_snapshot_output(temp19)
## n=256, mmax=20 LLY
temp20 <- guide_SOAs(s=4, el=3, m=15)
expect_snapshot_output(temp20)
## n=4096, mmax=340 LLY
temp21 <- guide_SOAs(s=4, el=3, m=100)
expect_snapshot_output(temp21)
## n=625, mmax=30 LLY
temp22 <- guide_SOAs(s=5, el=3, m=10)
expect_snapshot_output(temp22)
## empty output without error
temp23 <- guide_SOAs(s=2, el=2, n=8)
expect_snapshot_output(temp23)
})
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