riboflavin: Riboflavin GWAS dataset

In ScaleSpikeSlab: Scalable Spike-and-Slab

Riboflavin GWAS dataset

Description

Dataset of riboflavin production by Bacillus subtilis containing n = 71 observations of a one-dimensional response (riboflavin production) and p = 4088 predictors (gene expressions). The one-dimensional response corresponds to riboflavin production.

Usage

data(riboflavin)

Format

A data frame containing a vector y of length 71 (responses) and a matrix X of dimension 71 by 4088 (gene expressions)

Details

The processed dataset is the same as in the R packages qut and hdi.

References

Buhlmann, P., Kalisch, M. and Meier, L. (2014) High-dimensional statistics with a view towards applications in biology. Annual Review of Statistics and its Applications 1, 255–278

Examples

data(riboflavin)
y <- as.vector(riboflavin$y)
X <- as.matrix(riboflavin$x)

ScaleSpikeSlab documentation built on May 18, 2022, 5:18 p.m.