README.md

ScriptMapR

R Script Visualization in Cytoscape

This function allows the user to represent the content of a given script in 'Cytoscape' (https://cytoscape.org/). Therefore it is required to have a functioning version of 'Cytoscape' 3.6.1 or greater.

Color coding

Nodes

A color code is associated to each nodes:

Edges

Edge color reports the sequence of command on a blue scale

Node color code extend to edges in case of loops or tests

Edges of type sinewave represent the connection between a node and itself when used as an indice.

Edges of type dots represent the commands within a if, else, else if, ifelse or loop condition.



Try the ScriptMapR package in your browser

Any scripts or data that you put into this service are public.

ScriptMapR documentation built on Oct. 23, 2020, 8:11 p.m.