SeqGrapheR: Simple GUI for Graph Based Visualization of Cluster of DNA Sequence Reads

The SeqGrapheR package provide interactive GUI for visualization of DNA sequence clusters. Details and principles of usage are described in user manual and (2010 BMC Bioinformatics 11:378). For full functionality installed NCBI blast is required.

AuthorPetr Novak
Date of publication2015-07-20 18:08:53
MaintainerPetr Novak <petr@umbr.cas.cz>
LicenseGPL (>= 2)
Version0.4.8.5

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Files in this package

SeqGrapheR
SeqGrapheR/inst
SeqGrapheR/inst/images
SeqGrapheR/inst/images/color7.png
SeqGrapheR/inst/images/color4.png
SeqGrapheR/inst/images/size7.png
SeqGrapheR/inst/images/yellowArrow2.png
SeqGrapheR/inst/images/color2.png
SeqGrapheR/inst/images/yellowArrow.png
SeqGrapheR/inst/images/color1.png
SeqGrapheR/inst/images/leftArrow2.png
SeqGrapheR/inst/images/shape6.png
SeqGrapheR/inst/images/size2.png
SeqGrapheR/inst/images/rightArrow.png
SeqGrapheR/inst/images/size6.png
SeqGrapheR/inst/images/color5.png
SeqGrapheR/inst/images/color9.png
SeqGrapheR/inst/images/size3.png
SeqGrapheR/inst/images/shape3.png
SeqGrapheR/inst/images/size4.png
SeqGrapheR/inst/images/color3.png
SeqGrapheR/inst/images/size8.png
SeqGrapheR/inst/images/rightArrow2.png
SeqGrapheR/inst/images/shape4.png
SeqGrapheR/inst/images/shape1.png
SeqGrapheR/inst/images/leftArrow.png
SeqGrapheR/inst/images/color8.png
SeqGrapheR/inst/images/size5.png
SeqGrapheR/inst/images/shape7.png
SeqGrapheR/inst/images/shape5.png
SeqGrapheR/inst/images/shape2.png
SeqGrapheR/inst/images/color6.png
SeqGrapheR/inst/images/size1.png
SeqGrapheR/inst/doc
SeqGrapheR/inst/doc/SeqGrapheR.pdf
SeqGrapheR/inst/doc/SeqGrapheR.Rnw
SeqGrapheR/NAMESPACE
SeqGrapheR/R
SeqGrapheR/R/SeqGrapheR-package.R SeqGrapheR/R/SeqGrapheR.R
SeqGrapheR/vignettes
SeqGrapheR/vignettes/SeqGrapheR.pdf
SeqGrapheR/vignettes/SeqGrapheR.Rnw
SeqGrapheR/MD5
SeqGrapheR/DESCRIPTION
SeqGrapheR/man
SeqGrapheR/man/SeqGrapheR-package.Rd SeqGrapheR/man/SeqGrapheR.Rd

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