SeqGrapheR: Simple GUI for Graph Based Visualization of Cluster of DNA Sequence Reads

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The SeqGrapheR package provide interactive GUI for visualization of DNA sequence clusters. Details and principles of usage are described in user manual and (2010 BMC Bioinformatics 11:378). For full functionality installed NCBI blast is required.

Author
Petr Novak
Date of publication
2015-07-20 18:08:53
Maintainer
Petr Novak <petr@umbr.cas.cz>
License
GPL (>= 2)
Version
0.4.8.5

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Man pages

SeqGrapheR
SeqGrapheR - graph based interactive visualization of DNA...
SeqGrapheR-package
Simple GUI for graph based visualization of cluster of DNA...

Files in this package

SeqGrapheR
SeqGrapheR/inst
SeqGrapheR/inst/images
SeqGrapheR/inst/images/color7.png
SeqGrapheR/inst/images/color4.png
SeqGrapheR/inst/images/size7.png
SeqGrapheR/inst/images/yellowArrow2.png
SeqGrapheR/inst/images/color2.png
SeqGrapheR/inst/images/yellowArrow.png
SeqGrapheR/inst/images/color1.png
SeqGrapheR/inst/images/leftArrow2.png
SeqGrapheR/inst/images/shape6.png
SeqGrapheR/inst/images/size2.png
SeqGrapheR/inst/images/rightArrow.png
SeqGrapheR/inst/images/size6.png
SeqGrapheR/inst/images/color5.png
SeqGrapheR/inst/images/color9.png
SeqGrapheR/inst/images/size3.png
SeqGrapheR/inst/images/shape3.png
SeqGrapheR/inst/images/size4.png
SeqGrapheR/inst/images/color3.png
SeqGrapheR/inst/images/size8.png
SeqGrapheR/inst/images/rightArrow2.png
SeqGrapheR/inst/images/shape4.png
SeqGrapheR/inst/images/shape1.png
SeqGrapheR/inst/images/leftArrow.png
SeqGrapheR/inst/images/color8.png
SeqGrapheR/inst/images/size5.png
SeqGrapheR/inst/images/shape7.png
SeqGrapheR/inst/images/shape5.png
SeqGrapheR/inst/images/shape2.png
SeqGrapheR/inst/images/color6.png
SeqGrapheR/inst/images/size1.png
SeqGrapheR/inst/doc
SeqGrapheR/inst/doc/SeqGrapheR.pdf
SeqGrapheR/inst/doc/SeqGrapheR.Rnw
SeqGrapheR/NAMESPACE
SeqGrapheR/R
SeqGrapheR/R/SeqGrapheR-package.R
SeqGrapheR/R/SeqGrapheR.R
SeqGrapheR/vignettes
SeqGrapheR/vignettes/SeqGrapheR.pdf
SeqGrapheR/vignettes/SeqGrapheR.Rnw
SeqGrapheR/MD5
SeqGrapheR/DESCRIPTION
SeqGrapheR/man
SeqGrapheR/man/SeqGrapheR-package.Rd
SeqGrapheR/man/SeqGrapheR.Rd