cellRatioPlot: plot cell percentage barplot

In SeuratExplorer: An 'Shiny' App for Exploring scRNA-seq Data Processed in 'Seurat'

plot cell percentage barplot

Description

support facet, codes refer to: https://github.com/junjunlab/scRNAtoolVis/blob/master/R/cellRatioPlot.R, with modification

Usage

cellRatioPlot(
  object = NULL,
  sample.name = NULL,
  sample.order = NULL,
  celltype.name = NULL,
  celltype.order = NULL,
  facet.name = NULL,
  facet.order = NULL,
  col.width = 0.7,
  flow.alpha = 0.25,
  flow.curve = 0,
  color.choice = NULL
)

Arguments

object	an Seurat object
sample.name	x axis
sample.order	order for x axis
celltype.name	column fill by
celltype.order	order for fill by
facet.name	column name for facet
facet.order	the order for facet
col.width	column width, from 0-1
flow.alpha	transparency for flow
flow.curve	curve for flow
color.choice	color choice for fill

Value

a ggplot2 object

Examples

#NULL

SeuratExplorer documentation built on April 4, 2025, 1:57 a.m.