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Quantify, profile and remove ambient mRNA contamination (the "soup") from droplet based single cell RNA-seq experiments. Implements the method described in Young et al. (2018) <doi:10.1101/303727>.
Package details |
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Author | Matthew Daniel Young |
Maintainer | Matthew Daniel Young <my4@sanger.ac.uk> |
License | GPL-2 |
Version | 1.6.2 |
URL | https://github.com/constantAmateur/SoupX |
Package repository | View on CRAN |
Installation |
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