SpNMF: Supervised NMF

Non-negative Matrix Factorization(NMF) is a powerful tool for identifying the key features of microbial communities and a dimension-reduction method. When we are interested in the differences between the structures of two groups of communities, supervised NMF(Yun Cai, Hong Gu and Tobby Kenney (2017),<doi:10.1186/s40168-017-0323-1>) provides a better way to do this, while retaining all the advantages of NMF -- such as interpretability, and being based on a simple biological intuition.

Getting started

Package details

AuthorYun Cai [aut, cre], Hong Gu [aut], Toby Kenney [aut]
MaintainerYun Cai <[email protected]>
LicenseGPL-3
Version0.1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("SpNMF")

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SpNMF documentation built on Oct. 3, 2018, 9:05 a.m.