View source: R/neighbourhood.R
| wrap | R Documentation |
Generally useful for model development purposes. Primarily used internally
in e.g., crw if torus = TRUE.
wrap(X, bounds, withHeading = FALSE)
X |
|
bounds |
Either a |
withHeading |
logical. If |
If withHeading used, then X must be an sf or SpatVector object
that contains two columns, x1 and y1, with the immediately
previous agent locations.
Object of the same class as X, but with coordinates updated to reflect the wrapping.
Eliot McIntire
origDTThreads <- data.table::setDTthreads(2L)
origNcpus <- options(Ncpus = 2L)
xrange <- yrange <- c(-50, 50)
hab <- terra::rast(terra::ext(c(xrange, yrange)))
hab[] <- 0
# initialize agents
N <- 10
# previous points
x1 <- y1 <- rep(0, N)
# initial points
starts <- cbind(x = stats::runif(N, xrange[1], xrange[2]),
y = stats::runif(N, yrange[1], yrange[2]))
# create the agent object # the x1 and y1 are needed for "previous location"
agent <- terra::vect(data.frame(x1, y1, starts), geom = c("x", "y"))
ln <- rlnorm(N, 1, 0.02) # log normal step length
sd <- 30 # could be specified globally in params
if (interactive()) {
# clearPlot()
terra::plot(hab, col = "white")
}
for (i in 1:10) {
agent <- crw(agent = agent, extent = terra::ext(hab), stepLength = ln,
stddev = sd, lonlat = FALSE, torus = FALSE) # don't wrap
if (interactive()) terra::plot(agent[, 1], add = TRUE, col = 1:10)
}
terra::crds(agent) # many are "off" the map, i.e., beyond the extent of hab
agent <- SpaDES.tools::wrap(agent, bounds = terra::ext(hab))
terra::plot(agent, add = TRUE, col = 1:10) # now inside the extent of hab
# clean up
data.table::setDTthreads(origDTThreads)
options(Ncpus = origNcpus)
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