lung5: Example input data for 'SpaTopic'
In SpaTopic: Topic Inference to Identify Tissue Architecture in Multiplexed Images
lung5 R Documentation
Example input data for 'SpaTopic'
Description
multiplexed image data on tumor tissue sample from non small cell lung cancer patient
Usage
lung5
Format
## 'lung5'
A data frame with 100149 rows and 4 columns:
- image
Image ID
- X
X coordinate of the cell
- Y
Y coordinate of the cell
- type
cell type
Source
<https://nanostring.com/products/cosmx-spatial-molecular-imager/ffpe-dataset/nsclc-ffpe-dataset/>
See Also
SpaTopic_inference,Seurat5obj_to_SpaTopic
SpaTopic documentation built on April 4, 2025, 1:38 a.m.
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| lung5 | R Documentation |
Example input data for 'SpaTopic'
Description
multiplexed image data on tumor tissue sample from non small cell lung cancer patient
Usage
lung5
Format
## 'lung5' A data frame with 100149 rows and 4 columns:
- image
Image ID
- X
X coordinate of the cell
- Y
Y coordinate of the cell
- type
cell type
Source
<https://nanostring.com/products/cosmx-spatial-molecular-imager/ffpe-dataset/nsclc-ffpe-dataset/>
See Also
SpaTopic_inference,Seurat5obj_to_SpaTopic
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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