getBackground | Get the background of molecules |
getInteGraphList | Get the reconstructed metabolic pathway graphs |
GetK2riData | Get the environment data |
getLocSubGraph | Get the located metabolic subpathways |
identifyGraph | Annotate and identify subpathways |
initializeK2ri | Initialize environment variable k2ri |
plotGraph | Visualize a pathway graph |
printGraph | Print the results of graph annotation and identification |
SubpathwayGMir-internal | SubpathwayGMir internal functions |
SubpathwayGMir-package | The SubpathwayGMir package |
updateOrgEnvir | Update the organism-specific environment variables |
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