| box_plot | Box plot support two levels and multiple groups with P value. |
| chord_plot | Chord plot for visualizing the relationships of pathways and... |
| circos_heatmap | Circos heatmap plot for visualizing gene expressing in... |
| corr_heatmap | Correlation Heatmap for samples/groups based on Pearson... |
| degs_lists | Paired comparisons differentially expressed genes (degs)... |
| degs_stats | All DEGs of paired comparison CT-vs-LT12 stats dataframe. |
| degs_stats2 | All DEGs of paired comparison CT-vs-LT12 stats2 dataframe. |
| dendro_plot | Dendrograms for multiple samples/groups clustering. |
| flower_plot | Flower plot for stat common and unique gene among multiple... |
| gene_cluster_trend | Gene cluster trend plot for visualizing gene expression trend... |
| gene_expression | All genes in all samples expression dataframe of RNA-Seq. |
| gene_expression2 | Shared DEGs of all paired comparisons in all samples... |
| gene_expression3 | Shared DEGs of all paired comparisons in all groups... |
| gene_go_kegg | GO and KEGG annotation of background genes. |
| gene_go_kegg2 | GO and KEGG annotation of background genes. |
| gene_rank_plot | Gene ranking dotplot for visualizing differentailly expressed... |
| go_enrich | GO enrichment analysis based on GO annotation results... |
| go_enrich_bar | GO enrichment analysis and bar plot (None/Exist Reference... |
| go_enrich_dot | GO enrichment analysis and dot plot (None/Exist Reference... |
| go_enrich_net | GO enrichment analysis and net plot (None/Exist Reference... |
| go_enrich_stat | GO enrichment analysis and stat plot (None/Exist Reference... |
| heatmap_cluster | Heatmap cluster for visualizing clustered gene expression... |
| heatmap_group | Heatmap group for visualizing grouped gene expression data. |
| kegg_enrich | KEGG enrichment analysis based on KEGG annotation results... |
| kegg_enrich_bar | KEGG enrichment analysis and bar plot (None/Exist Reference... |
| kegg_enrich_dot | KEGG enrichment analysis and dot plot (None/Exist Reference... |
| kegg_enrich_net | KEGG enrichment analysis and net plot (None/Exist Reference... |
| ma_plot | MversusA plot for visualizing differentially expressed genes. |
| network_data | Network data from WGCNA tan module top-200 dataframe. |
| network_plot | Network plot for analyzing and visualizing relationship of... |
| pca_analysis | PCA dimensional reduction analysis for RNA-Seq. |
| pca_plot | PCA dimensional reduction visualization for RNA-Seq. |
| quantile_plot | Quantile plot for visualizing data distribution. |
| samples_groups | Samples and groups for gene expression. |
| survival_data | Survival data as example data for survival_plot function. |
| survival_plot | Survival plot for analyzing and visualizing survival data. |
| table_cross | Table cross used to cross search and merge results in two... |
| table_filter | Table filter used to filter row by column condition. |
| table_merge | Table merge used to merge multiple variables to on variable. |
| table_split | Table split used for splitting a grouped column to multiple... |
| tomicsvis | TOmicsVis shiny app start function. |
| traits_sex | Length, Width, Weight, and Sex traits dataframe. |
| trend_plot | Trend plot for visualizing gene expression trend profile in... |
| tsne_analysis | TSNE analysis for analyzing and visualizing TSNE algorithm. |
| tsne_plot | TSNE plot for analyzing and visualizing TSNE algorithm. |
| umap_analysis | UMAP analysis for analyzing RNA-Seq data. |
| umap_plot | UMAP plot for analyzing and visualizing UMAP algorithm. |
| upsetr_plot | UpSet plot for stat common and unique gene among multiple... |
| venn_plot | Venn plot for stat common and unique gene among multiple... |
| violin_plot | Violin plot support two levels and multiple groups with P... |
| volcano_plot | Volcano plot for visualizing differentailly expressed genes. |
| weight_sex | Weight and Sex traits dataframe. |
| wgcna_pipeline | WGCNA analysis pipeline for RNA-Seq. |
