Description Usage Arguments Examples

Plot method for an object of class ‘TPidm’. It draws the estimated occupation probabilities (if s = 0) or transition probabilities (if s > 0) and confidence intervals (only available if `CI`

is `TRUE`

) in a basic scatterplot or in a multipanel layout.

1 2 |

`x` |
An object of class ‘TPidm’. |

`chosen.tr` |
Character vector of the form ‘c(“from to”, “from to”)’ specifying which transitions should be plotted. Default, all the transition probabilities are plotted. |

`col` |
Character vector specifying colors for each curves. Default |

`...` |
Further arguments to plot. |

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 | ```
data(colonTP)
# create a TPidm object with s = 0, t = "last" (default),
# CI = FALSE and method = "NM" (default):
nm0 <- TPidm(colonTP, s = 0, CI=FALSE)
# plot all possible transitions without CI:
plot(nm0)
# or
# create a TPidm object with s = 0, t = "last" (default),
# CI = TRUE (default) and method = "AJ":
aj0ci <- TPidm(colonTP, s = 0, method = "AJ")
# plot transitions "1 2" and "1 3" with CI:
plot(aj0ci, chosen.tr = c("1 2", "1 3"))
# create a TPidm object with s = 365, t = 1095, cov = "rx",
# CI = FALSE and method = "NM" (default):
nm365cov <- TPidm(colonTP, s = 365, t = 1095, cov = "rx", CI=FALSE)
# plot transitions "1 2" and "1 3" without CI:
plot(nm365cov, chosen.tr = c("1 2", "1 3"), col=c("blue","red","green"))
``` |

TP.idm documentation built on April 19, 2018, 1:04 a.m.

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