Man pages for TcGSA
Time-Course Gene Set Analysis
| chisqmix | Chi-Squared Mixtures Distribution |
| clustTrend | Cluster the genes dynamics into different dominant trends. |
| data_simu_TcGSA | Simulated Data for TcGSA |
| multtest.TcGSA | Computing the P-value of the Likelihood Ratios Applying a... |
| plot1GS | Plotting a Specific Gene Set |
| plotFit.GS | Plotting function for exploring the fitness of the mixed... |
| plotMultipleGS | Plotting Multiple Gene Sets in a single plot |
| plotPat.1GS | Plotting a Specific Gene Set Stratifying on Patients |
| plotPat.TcGSA | Plot a Gene Set Trends Heatmap for each Patient. |
| plotSelect.GS | Plotting (several) Selected Gene Set(s) in some Subjects |
| plot.TcGSA | Plot a Gene Set Trends Heatmap. |
| pval_simu | Computing P-values with a Simulated Sample from the Null... |
| signifLRT.TcGSA | Identifying the Significant Gene Sets |
| summary.TcGSA | Summarizing TcGSA |
| TcGSA-internal | Internal TcGSA Functions |
| TcGSA.LR | Computing the Likelihood Ratios for the Gene Sets under... |
| TcGSA.LR.parallel | Parallel computing the Likelihood Ratios for the Gene Sets... |
| TcGSA-package | Time-course Gene Set Analysis |
