Files in TreatmentPatterns
Analyzes Real-World Treatment Patterns of a Study Population of Interest

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/getResultsDataModelSpecification.R R/createSunburstPlot.R R/executeTreatmentPatterns.R R/constructPathways.R R/CDMInterface.R R/ggSunburst.R R/TreatmentPatternsResults.R R/TreatmentPatterns-package.R R/exportPatientLevel.R R/createSankeyDiagram.R R/computePathways.R R/attrition.R R/export.R R/plotEventDuration.R
inst/CITATION
inst/resultsDataModelSpecifications.csv
inst/WORDLIST
inst/doc/a000_bestPractices.html
inst/doc/a010_Computing_Pathways.html
inst/doc/a010_Computing_Pathways.R
inst/doc/a020_Exporting.html
inst/doc/a999_Strategus.html
inst/doc/a030_Evaluating_Output.Rmd inst/doc/a000_bestPractices.Rmd inst/doc/a030_Evaluating_Output.R inst/doc/a999_Strategus.R
inst/doc/a001_DefiningCohorts.html
inst/doc/a020_Exporting.R inst/doc/a999_Strategus.Rmd inst/doc/a001_DefiningCohorts.Rmd
inst/doc/a030_Evaluating_Output.html
inst/doc/a000_bestPractices.R inst/doc/a010_Computing_Pathways.Rmd inst/doc/a020_Exporting.Rmd inst/doc/a001_DefiningCohorts.R
inst/DummyOutput/metadata.csv
inst/DummyOutput/counts_year.csv
inst/DummyOutput/cdm_source_info.csv
inst/DummyOutput/summary_event_duration.csv
inst/DummyOutput/counts_sex.csv
inst/DummyOutput/analyses.csv
inst/DummyOutput/counts_age.csv
inst/DummyOutput/treatment_pathways.csv
inst/DummyOutput/attrition.csv
inst/DummyOutput/arguments.csv
inst/DummyOutput/output.zip
inst/sql/ageRefTable.sql
inst/sql/selectData.sql
inst/exampleCohorts/Doxylamine.json
inst/exampleCohorts/ViralSinusitis.json
inst/exampleCohorts/Acetaminophen.json
inst/exampleCohorts/Clavulanate.json
inst/exampleCohorts/Death.json
inst/exampleCohorts/Aspirin.json
inst/exampleCohorts/Amoxicillin.json
inst/exampleCohorts/PenicillinV.json
inst/docs/sankeydiagram.png
inst/docs/package.png
inst/docs/sunburstplot.png
inst/docs/pathwaysettings.png
inst/docs/TreatmentPatternsStudy.pdf inst/docs/TreatmentPatterns_1.0.0.pdf
build/vignette.rds
build/partial.rdb
tests/testthat.R tests/testthat/test-exportPatientLevel.R tests/testthat/test-CRAN.R tests/testthat/test-getResultsDataModelSpecifications.R tests/testthat/test-pathwaysMultipleTargetsLogical.R tests/testthat/test-multipleCohortTables.R tests/testthat/test-computePathways.R tests/testthat/test-createSunburstPlot.R tests/testthat/test-export.R tests/testthat/test-CDMInterfaceDBC.R tests/testthat/test-CDMInterfaceCDMC.R tests/testthat/helper-generateCohortTableCDMC.R tests/testthat/helper-ableToRun.R tests/testthat/test-CDMInterface.R tests/testthat/test-createSankeyDiagram.R tests/testthat/helper-generateCohortTableCG.R tests/testthat/test-pathwaysLogical.R tests/testthat/test-plotEventDuration.R tests/testthat/test-executeTreatmentPatterns.R tests/testthat/test-TreatmentPatternsResults.R tests/testthat/setup.R tests/testthat/test-ggSunburst.R vignettes/a030_Evaluating_Output.Rmd vignettes/a000_bestPractices.Rmd vignettes/a999_Strategus.Rmd vignettes/a001_DefiningCohorts.Rmd vignettes/a010_Computing_Pathways.Rmd vignettes/a020_Exporting.Rmd
vignettes/figures/a05_combination_2.png
vignettes/figures/a03_window_3.png
vignettes/figures/a04_splitTime_1.png
vignettes/figures/a05_combination_1.png
vignettes/figures/a011_filterTreatments_all_merge.png
vignettes/figures/a04_splitTime_2.png
vignettes/figures/a011_filterTreatments_changes.png
vignettes/figures/a011_filterTreatments_all.png
vignettes/figures/a000_graph.png
vignettes/figures/a011_filterTreatments_first.png
vignettes/figures/a03_window_1.png
vignettes/figures/a03_window_2.png
man/plotEventDuration.Rd man/executeTreatmentPatterns.Rd man/TreatmentPatterns-package.Rd man/createSankeyDiagram.Rd man/export.Rd man/computePathways.Rd man/ggSunburst.Rd man/createSunburstPlot.Rd man/TreatmentPatternsResults.Rd man/exportPatientLevel.Rd man/getResultsDataModelSpecifications.Rd
man/figures/periodPrioToIndex0.png
man/figures/sankeydiagram.png
man/figures/package.png
man/figures/periodPrioToIndex5.png
man/figures/sunburstplot.png
man/figures/pathwaysettings.png
man/figures/periodPrioToIndex.png
TreatmentPatterns documentation built on June 8, 2025, 11:18 a.m.