TreatmentSelection: Evaluate Treatment Selection Biomarkers

A suite of descriptive and inferential methods designed to evaluate one or more biomarkers for their ability to guide patient treatment recommendations. Package includes functions to assess the calibration of risk models; and plot, evaluate, and compare markers.

Install the latest version of this package by entering the following in R:
install.packages("TreatmentSelection")
AuthorMarshall Brown and Holly Janes
Date of publication2017-02-09 10:18:33
MaintainerMarshall Brown <mdbrown@fhcrc.org>
LicenseGPL-2
Version2.0.3
http://mdbrown.github.io/TreatmentSelection/

View on CRAN

Functions

calibrate Man page
calibrate.trtsel Man page
compare Man page
compare.trtsel Man page
evaluate Man page
evaluate.trtsel Man page
is.trtsel Man page
plot Man page
plot.trtsel Man page
print.calibrate.trtsel Man page
print.compare.trtsel Man page
print.eval.trtsel Man page
print.trtsel Man page
print.trtsel_summary_measures Man page
surv_tsdata Man page
TreatmentSelection Man page
TreatmentSelection-package Man page
trtsel Man page
trtsel_measures Man page
tsdata Man page
tsdata_cc Man page
tsdata_scc Man page

Files

inst
inst/check.R
inst/todo.Rmd
inst/example
inst/example/example.R
inst/example/tutorial.md
inst/example/TreatmentSelectionExample.R inst/example/checkSubCohortEstimation.R
inst/example/tutorial.html
inst/example/figure
inst/example/figure/unnamed-chunk-14.png
inst/example/figure/unnamed-chunk-15.png
inst/example/figure/unnamed-chunk-16.png
inst/example/figure/unnamed-chunk-6.png
inst/example/figure/unnamed-chunk-7.png
inst/example/figure/unnamed-chunk-18.png
inst/example/figure/unnamed-chunk-9.png
inst/example/figure/unnamed-chunk-10.png
inst/example/tutorial.Rmd
inst/example/tutorial_reference.html
NAMESPACE
NEWS
data
data/tsdata_scc.rda
data/surv_tsdata.rda
data/tsdata_cc.rda
data/tsdata.rda
R
R/evaluate.trtsel.R R/myplotcompare.trtsel.R R/EventRateVec.R R/get.risk.R R/one.boot.plot.R R/calibrate.trtsel.R R/TreatmentSelection-package.R R/get.summary.measures.R R/print.trtsel.R R/boot.sample.R R/get.plot.ci.R R/get.F.R R/one.boot.compare.R R/timetoevent_subroutines.R R/trtsel.boot.R R/one.boot.eval.R R/predcurvePLOT.R R/plot.trtsel.R R/get.coef.R R/trteffectPLOT.R R/estimate_measures.R R/trtsel.R R/subroutines.R R/CDFdeltaPLOT.R R/SelectionImpactPLOT_gg.R R/is.trtsel.R R/test.Null.R R/compare.trtsel.R
README.md
MD5
DESCRIPTION
man
man/surv_tsdata.Rd man/print.calibrate.trtsel.Rd man/TreatmentSelection-package.Rd man/print.trtsel_summary_measures.Rd man/print.eval.trtsel.Rd man/plot.trtsel.Rd man/compare.trtsel.Rd man/tsdata_scc.Rd man/calibrate.trtsel.Rd man/tsdata_cc.Rd man/print.trtsel.Rd man/compare.Rd man/is.trtsel.Rd man/tsdata.Rd man/trtsel_measures.Rd man/trtsel.Rd man/print.compare.trtsel.Rd man/evaluate.trtsel.Rd

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