API for UCSCXenaTools
Download and Explore Datasets from UCSC Xena Data Hubs
| Global functions | |
|---|---|
| %>% | Man page |
| .XenaHub | Man page |
| .arrayfmt | Source code |
| .attach_this | Source code |
| .call | Source code |
| .cohort_datasets | Source code |
| .cohort_datasets_count | Source code |
| .cohort_datasets_query | Source code |
| .cohort_samples_all | Source code |
| .cohort_samples_all_query | Source code |
| .cohort_samples_any | Source code |
| .cohort_samples_any_query | Source code |
| .cohort_samples_each | Source code |
| .collapse | Source code |
| .collapse_cohort | Source code |
| .collapse_list | Source code |
| .dataset_samples_all | Source code |
| .dataset_samples_all_query | Source code |
| .dataset_samples_any | Source code |
| .dataset_samples_any_query | Source code |
| .dataset_samples_each | Source code |
| .decodeDataType | Source code |
| .host_cohorts | Source code |
| .host_cohorts_query | Source code |
| .host_is_alive | Source code |
| .init_api | Source code |
| .make_fun | Source code |
| .marshall_param | Source code |
| .onAttach | Source code |
| .p_all_cohorts | Man page |
| .p_all_datasets | Man page |
| .p_all_datasets_n | Man page |
| .p_all_field_metadata | Man page |
| .p_cohort_samples | Man page |
| .p_cohort_summary | Man page |
| .p_dataset_fetch | Man page |
| .p_dataset_field | Man page |
| .p_dataset_field_examples | Man page |
| .p_dataset_field_n | Man page |
| .p_dataset_gene_probe_avg | Man page |
| .p_dataset_gene_probes_values | Man page |
| .p_dataset_list | Man page |
| .p_dataset_metadata | Man page |
| .p_dataset_probe_signature | Man page |
| .p_dataset_probe_values | Man page |
| .p_dataset_samples | Man page |
| .p_dataset_samples_ndense_matrix | Man page |
| .p_dataset_sources | Man page |
| .p_dataset_status | Man page |
| .p_datasets_null_rows | Man page |
| .p_feature_list | Man page |
| .p_field_codes | Man page |
| .p_field_metadata | Man page |
| .p_gene_transcripts | Man page |
| .p_match_fields | Man page |
| .p_probe_count | Man page |
| .p_probemap_list | Man page |
| .p_ref_gene_exons | Man page |
| .p_ref_gene_position | Man page |
| .p_ref_gene_range | Man page |
| .p_segment_data_examples | Man page |
| .p_segmented_data_range | Man page |
| .p_sparse_data | Man page |
| .p_sparse_data_examples | Man page |
| .p_sparse_data_match_field | Man page |
| .p_sparse_data_match_field_slow | Man page |
| .p_sparse_data_match_partial_field | Man page |
| .p_sparse_data_range | Man page |
| .p_transcript_expression | Man page |
| .quote | Source code |
| .quote_cohort | Source code |
| .rm_extension | Source code |
| .samples_all_query | Source code |
| .samples_any_query | Source code |
| .samples_by_cohort | Source code |
| .samples_by_dataset | Source code |
| .samples_by_host | Source code |
| .xena_post | Source code |
| .xq_all_cohorts | Man page |
| .xq_all_datasets | Man page |
| .xq_all_datasets_n | Man page |
| .xq_all_field_metadata | Man page |
| .xq_cohort_samples | Man page |
| .xq_cohort_summary | Man page |
| .xq_dataset_fetch | Man page |
| .xq_dataset_field | Man page |
| .xq_dataset_field_examples | Man page |
| .xq_dataset_field_n | Man page |
| .xq_dataset_gene_probe_avg | Man page |
| .xq_dataset_gene_probes_values | Man page |
| .xq_dataset_list | Man page |
| .xq_dataset_metadata | Man page |
| .xq_dataset_probe_signature | Man page |
| .xq_dataset_probe_values | Man page |
| .xq_dataset_samples | Man page |
| .xq_dataset_samples_ndense_matrix | Man page |
| .xq_dataset_sources | Man page |
| .xq_dataset_status | Man page |
| .xq_datasets_null_rows | Man page |
| .xq_feature_list | Man page |
| .xq_field_codes | Man page |
| .xq_field_metadata | Man page |
| .xq_gene_transcripts | Man page |
| .xq_match_fields | Man page |
| .xq_probe_count | Man page |
| .xq_probemap_list | Man page |
| .xq_ref_gene_exons | Man page |
| .xq_ref_gene_position | Man page |
| .xq_ref_gene_range | Man page |
| .xq_segment_data_examples | Man page |
| .xq_segmented_data_range | Man page |
| .xq_sparse_data | Man page |
| .xq_sparse_data_examples | Man page |
| .xq_sparse_data_match_field | Man page |
| .xq_sparse_data_match_field_slow | Man page |
| .xq_sparse_data_match_partial_field | Man page |
| .xq_sparse_data_range | Man page |
| .xq_transcript_expression | Man page |
| UCSCXenaTools-dynamic | Man page |
| XenaBrowse | Man page Source code |
| XenaData | Man page |
| XenaDataUpdate | Man page Source code |
| XenaDownload | Man page Source code |
| XenaFilter | Man page Source code |
| XenaGenerate | Man page Source code |
| XenaHub | Man page Source code |
| XenaHub-class | Man page |
| XenaPrepare | Man page Source code |
| XenaQuery | Man page Source code |
| XenaQueryProbeMap | Man page Source code |
| XenaScan | Man page Source code |
| `%||%` | Source code |
| availTCGA | Man page Source code |
| check_hiplot | Source code |
| cohorts | Man page Source code |
| datasets | Man page Source code |
| download.file2 | Source code |
| downloadTCGA | Man page Source code |
| fetch | Man page Source code |
| fetch_dataset_identifiers | Man page Source code |
| fetch_dataset_samples | Man page Source code |
| fetch_dense_values | Man page Source code |
| fetch_sparse_values | Man page Source code |
| getTCGAdata | Man page Source code |
| has_probeMap | Man page Source code |
| hosts | Man page Source code |
| http_error2 | Source code |
| samples | Man page Source code |
| showTCGA | Man page Source code |
| to_snake | Man page Source code |
| url_encode | Source code |
| use_cache | Source code |
| xena_default_hosts | Man page Source code |
