XenaFilter | R Documentation |
One of main functions in UCSCXenatools. It is used to filter
XenaHub
object according to cohorts, datasets. All datasets can be found
at https://xenabrowser.net/datapages/.
XenaFilter( x, filterCohorts = NULL, filterDatasets = NULL, ignore.case = TRUE, ... )
x |
a XenaHub object |
filterCohorts |
default is |
filterDatasets |
default is |
ignore.case |
if |
... |
other arguments except |
a XenaHub
object
Shixiang Wang w_shixiang@163.com
# operate TCGA datasets xe = XenaGenerate(subset = XenaHostNames == "tcgaHub") xe # get all names of clinical data xe2 = XenaFilter(xe, filterDatasets = "clinical") datasets(xe2)
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