UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets

Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks.

Author
Jake Conway [cre], Nils Gehlenborg [aut]
Date of publication
2016-11-10 17:57:08
Maintainer
Jake Conway <jake_conway@hms.harvard.edu>
License
MIT + file LICENSE
Version
1.3.1
URLs

View on CRAN

Man pages

elements
Element query for queries paramter
fromExpression
Expression to UpSetR converters
fromList
List of named vectors to UpSetR converter
histogram
Histogram for custom plot
intersects
Intersection query for queries paramter
scatter_plot
Scatterplot for customplot
upset
UpSetR Plot

Files in this package

UpSetR
UpSetR/inst
UpSetR/inst/extdata
UpSetR/inst/extdata/movies.csv
UpSetR/inst/extdata/mutations.csv
UpSetR/inst/doc
UpSetR/inst/doc/queries.R
UpSetR/inst/doc/queries.html
UpSetR/inst/doc/attribute.plots.Rmd
UpSetR/inst/doc/set.metadata.plots.Rmd
UpSetR/inst/doc/basic.usage.R
UpSetR/inst/doc/basic.usage.Rmd
UpSetR/inst/doc/set.metadata.plots.html
UpSetR/inst/doc/attribute.plots.R
UpSetR/inst/doc/set.metadata.plots.R
UpSetR/inst/doc/attribute.plots.html
UpSetR/inst/doc/basic.usage.html
UpSetR/inst/doc/queries.Rmd
UpSetR/NAMESPACE
UpSetR/NEWS
UpSetR/R
UpSetR/R/Intersection.queries.R
UpSetR/R/Element.queries.R
UpSetR/R/UpSet.plot.R
UpSetR/R/intersects.R
UpSetR/R/upset.R
UpSetR/R/Boxplot.R
UpSetR/R/Custom.plots.R
UpSetR/R/MainBar.R
UpSetR/R/General.query.funcs.R
UpSetR/R/histogram.R
UpSetR/R/SizeBar.R
UpSetR/R/Helper.funcs.R
UpSetR/R/scatter_plot.R
UpSetR/R/fromList.R
UpSetR/R/Matrix.R
UpSetR/R/fromExpression.R
UpSetR/R/elements.R
UpSetR/R/Set.metadata.R
UpSetR/R/Custom.user.queries.R
UpSetR/R/Specific.intersections.R
UpSetR/R/Metadata.plots.R
UpSetR/vignettes
UpSetR/vignettes/attribute.plots.Rmd
UpSetR/vignettes/set.metadata.plots.Rmd
UpSetR/vignettes/basic.usage.Rmd
UpSetR/vignettes/queries.Rmd
UpSetR/README.md
UpSetR/MD5
UpSetR/build
UpSetR/build/vignette.rds
UpSetR/DESCRIPTION
UpSetR/man
UpSetR/man/fromList.Rd
UpSetR/man/intersects.Rd
UpSetR/man/fromExpression.Rd
UpSetR/man/upset.Rd
UpSetR/man/elements.Rd
UpSetR/man/scatter_plot.Rd
UpSetR/man/histogram.Rd
UpSetR/LICENSE