Files in VALERIE
Visualising Splicing at Single-Cell Resolution
MD5
NAMESPACE
DESCRIPTION
build/vignette.rds
R/Script_VALERIE_PlotPSI_A3SS_MultiGroups.R
R/Script_VALERIE_PlotPSI_SE_MultiGroups.R
R/Script_VALERIE_PlotPSI.R
R/Script_VALERIE_PlotPSI_A5SS_MultiGroups.R
R/Script_VALERIE_PlotPSI_SE_TwoGroups.R
R/Script_VALERIE_PlotPSI_A3SS_TwoGroups.R
R/Script_VALERIE_PlotPSI_MXE_TwoGroup.R
R/Script_VALERIE_ComputePSI.R
R/Script_VALERIE_PlotPSI_MXE_MultiGroups.R
R/Script_VALERIE_PlotPSI_A5SS_TwoGroups.R
R/Script_VALERIE_PlotPSI_RI_TwoGroups.R
R/Script_VALERIE_PlotPSI_RI_MultiGroups.R
vignettes/VALERIE.Rmd
man/PlotPSI.A5SS.MultiGroups.Rd
man/PlotPSI.SE.MultiGroups.Rd
man/PlotPSI.MXE.MultiGroups.Rd
man/PlotPSI.MXE.TwoGroups.Rd
man/PlotPSI.A3SS.MultiGroups.Rd
man/PlotPSI.A5SS.TwoGroups.Rd
man/PlotPSI.SE.TwoGroups.Rd
man/PlotPSI.Rd
man/ComputePSI.Rd
man/PlotPSI.RI.MultiGroups.Rd
man/PlotPSI.A3SS.TwoGroups.Rd
man/PlotPSI.RI.TwoGroups.Rd
inst/doc/VALERIE.Rmd
inst/doc/VALERIE.pdf
inst/doc/VALERIE.R
inst/extdata/Sample_Info/Sample_Info_RED_Two_Groups.txt
inst/extdata/Sample_Info/Sample_Info.txt
inst/extdata/Sample_Info/Sample_Info_RED_Multi_Groups.txt
inst/extdata/Sample_Info/Sample_Info_small.txt
inst/extdata/Exon_Info/Exon_Info_RED_small.txt
inst/extdata/Exon_Info/Exon_Info_Further_Examples.txt
inst/extdata/Exon_Info/Exon_Info_RED.txt
inst/extdata/Exon_Info/Exon_Info.txt
inst/extdata/Plots/1_SE_Plots_Mbp.pdf
inst/extdata/PSI/PSI_RED_Two_Groups_small.rds
inst/extdata/PSI/PSI_RED_Two_Groups.rds
inst/extdata/PSI/PSI_RED_Multi_Groups_small.rds
inst/extdata/PSI/PSI_RED_Multi_Groups.rds
inst/extdata/BAM/SRR7104321_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103365_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103385_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7105040_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103268_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103107_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103463_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104356_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103591_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104024_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103268_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103349_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103587_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103564_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7105057_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103591_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104290_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104254_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103375_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103376_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103440_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104321_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104723_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103242_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103107_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103235_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104311_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103513_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103513_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104791_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103509_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103587_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104203_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103997_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104299_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104048_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104201_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103287_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104038_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103425_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7105011_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103996_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103385_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103586_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103236_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104209_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104126_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104723_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104762_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104041_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103969_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104198_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104222_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104298_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104032_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7105057_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104619_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103541_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103583_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104561_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103980_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103415_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103248_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104127_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103263_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104013_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103347_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103582_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104007_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103439_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103248_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103425_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104010_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103509_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103296_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103376_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104533_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104170_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104298_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103290_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104136_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104311_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103463_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103583_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104251_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103589_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104316_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103969_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104303_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103277_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104619_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103450_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103286_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104711_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104222_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103255_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104127_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104861_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104048_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104322_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104071_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103290_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104010_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104562_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7105061_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103563_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103586_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104198_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103482_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104007_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104514_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104041_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104315_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103296_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103450_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103589_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104203_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104035_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104861_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103541_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104038_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104299_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103993_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103287_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103439_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104972_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103563_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104514_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103277_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7105061_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104562_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103370_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103582_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103995_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104254_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104322_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104972_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103255_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104126_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103242_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103395_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104195_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103347_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103236_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103238_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104201_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104209_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103375_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103466_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104035_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103997_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104071_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7105011_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104316_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104282_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104142_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103974_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104213_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104290_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104213_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103993_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103395_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104013_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104195_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104140_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104533_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103235_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104561_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103482_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104303_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104140_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104136_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103974_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103263_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103238_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104251_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7105040_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103486_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103564_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104282_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104315_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103415_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104243_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103349_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103365_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103995_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103484_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104142_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104356_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104243_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103484_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104170_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7104711_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103286_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103518_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103518_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103440_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103980_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104024_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104791_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104032_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103466_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103486_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam
inst/extdata/BAM/SRR7103370_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7103996_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
inst/extdata/BAM/SRR7104762_STAR_aligned_2ndPass_Aligned.sortedByCoord.out.bam.bai
