VBmix: Variational Bayesian Mixture Models

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Variational algorithms and methods for fitting mixture models. Main functions are varbayes, vbcomp, vbconstr, mppca, mmppca and gmmkmsock.

Author
Pierrick Bruneau
Date of publication
2015-08-24 16:21:35
Maintainer
Pierrick Bruneau <pbruneau@gmail.com>
License
GPL-2 | GPL-3
Version
0.3.1

View on CRAN

Man pages

appendToGmm
appendToGmm
appendToList
appendToList
appendToMppca
appendToMppca
binnedEntropy
binnedEntropy
buildFrame
buildFrame
circlegen
circlegen
constrClassif
constrClassif
covgen
covgen
dat1sample
dat1sample
dat2sample
dat2sample
dat3sample
dat3sample
datagen
datagen
dDirichlet
dDirichlet
displayGraph
displayGraph
displayNnet
displayNnet
displayScatter
displayScatter
displaySVM
displaySVM
eigenMppca
eigenMppca
EM
EM
extractSimpleModel
extractSimpleModel
gaussianKL
gaussianKL
gdist
Pairwise distance between groups
generate2Dtransform
generate2Dtransform
generateSparsePoints
generateSparsePoints
getBic
getBic
getColor
getColor
getCouple
getCouple
getDataLikelihood
getDataLikelihood
getLabels
getLabels
getQforComp
getQforComp
getResp
getResp
getVarbayesResp
getVarbayesResp
gmmdensity
gmmdensity
gmmgen
gmmgen
gmmkmsock
gmmkmsock
gmmpen
gmmpen
gmmToMppca
gmmToMppca
gramschmidt
gramschmidt
gridGen
gridGen
handdat
handdat
handdomains
handdomains
handlab
handlab
handnonvoid
handnonvoid
handvoid
handvoid
imglabels
imglabels
imgmods
imgmods
imgnames
imgnames
incremMerge
incremMerge
irisdata
irisdata
irislabels
irislabels
isNonVoid
isNonVoid
jsmc
jsmc
jsut
jsut
klmc
klmc
klut
klut
l2norm
l2norm
mergeClassif
mergeClassif
mixKnn
mixKnn
mkmeans
Mahalanobis K-means
mmppca
mmppca
mppca
mppca
mppcaToGmm
mppcaToGmm
multinomial
multinomial
mvndensity
mvndensity
mvngen
mvngen
mvnradiusdensity
mvnradiusdensity
mymvn2plot
mymvn2plot
mySmoothScatter
mySmoothScatter
newGmm
newGmm
newMppca
newMppca
normalizeVariable
normalizeVariable
normMppca
normMppca
pca
pca
pcapen
pcapen
pendat
pendat
penlab
penlab
pixmapToVector
pixmapToVector
plotGmm
plotGmm
randomGmm
randomGmm
rDirichlet
rDirichlet
reBuild
reBuild
RGBtoLab
RGBtoLab
sampleClassif
sampleClassif
semispheregen
semispheregen
setDomain
setDomain
sort_index
sort_index
spiralgen
spiralgen
subGmm
subGmm
subMppca
subMppca
subVarbayes
subVarbayes
varbayes
varbayes
vbcomp
vbcomp
vbconstr
vbconstr
vbpen
vbpen
ZtoLabels
ZtoLabels

Files in this package

VBmix
VBmix/COPYING
VBmix/inst
VBmix/inst/lowerpack.pdf
VBmix/inst/socket
VBmix/inst/socket/Makefile
VBmix/inst/socket/sockclient.cpp
VBmix/inst/socket/sockserver.cpp
VBmix/inst/suffstats.pdf
VBmix/configure.ac
VBmix/src
VBmix/src/parsers.c
VBmix/src/dirichlet.c
VBmix/src/utils.c
VBmix/src/config.h.in
VBmix/src/mppca.cpp
VBmix/src/varbayes.h
VBmix/src/couple.c
VBmix/src/parsers.h
VBmix/src/vbconstr.c
VBmix/src/getLabels.c
VBmix/src/vbcomp.c
VBmix/src/config.h
VBmix/src/mmppca.h
VBmix/src/varbayes.c
VBmix/src/vbconstr.h
VBmix/src/utils.h
VBmix/src/mkmeans.h
VBmix/src/EM.c
VBmix/src/Makevars.in
VBmix/src/test.c
VBmix/src/test.h
VBmix/src/EM.h
VBmix/src/knn.c
VBmix/src/mmppca.c
VBmix/src/gmmkmsock.cpp
VBmix/src/mppca.h
VBmix/src/vbcomp.h
VBmix/src/mkmeans.c
VBmix/NAMESPACE
VBmix/data
VBmix/data/datalist
VBmix/data/VBmix.RData
VBmix/R
VBmix/R/displayScatter.R
VBmix/R/interfaces.R
VBmix/R/displayGraph.R
VBmix/R/Rutils.R
VBmix/R/RGBtoLab.R
VBmix/MD5
VBmix/README
VBmix/DESCRIPTION
VBmix/configure
VBmix/man
VBmix/man/vbcomp.Rd
VBmix/man/binnedEntropy.Rd
VBmix/man/handdomains.Rd
VBmix/man/mvnradiusdensity.Rd
VBmix/man/mmppca.Rd
VBmix/man/vbconstr.Rd
VBmix/man/RGBtoLab.Rd
VBmix/man/eigenMppca.Rd
VBmix/man/irislabels.Rd
VBmix/man/sort_index.Rd
VBmix/man/gramschmidt.Rd
VBmix/man/penlab.Rd
VBmix/man/dat3sample.Rd
VBmix/man/getDataLikelihood.Rd
VBmix/man/gmmdensity.Rd
VBmix/man/subGmm.Rd
VBmix/man/EM.Rd
VBmix/man/semispheregen.Rd
VBmix/man/normalizeVariable.Rd
VBmix/man/subMppca.Rd
VBmix/man/l2norm.Rd
VBmix/man/klmc.Rd
VBmix/man/pixmapToVector.Rd
VBmix/man/getQforComp.Rd
VBmix/man/varbayes.Rd
VBmix/man/generateSparsePoints.Rd
VBmix/man/datagen.Rd
VBmix/man/vbpen.Rd
VBmix/man/newGmm.Rd
VBmix/man/klut.Rd
VBmix/man/gmmToMppca.Rd
VBmix/man/mppcaToGmm.Rd
VBmix/man/gaussianKL.Rd
VBmix/man/buildFrame.Rd
VBmix/man/gmmgen.Rd
VBmix/man/getResp.Rd
VBmix/man/displayGraph.Rd
VBmix/man/mkmeans.Rd
VBmix/man/appendToGmm.Rd
VBmix/man/gridGen.Rd
VBmix/man/newMppca.Rd
VBmix/man/handdat.Rd
VBmix/man/setDomain.Rd
VBmix/man/mvngen.Rd
VBmix/man/mergeClassif.Rd
VBmix/man/extractSimpleModel.Rd
VBmix/man/mvndensity.Rd
VBmix/man/normMppca.Rd
VBmix/man/mixKnn.Rd
VBmix/man/handvoid.Rd
VBmix/man/randomGmm.Rd
VBmix/man/handnonvoid.Rd
VBmix/man/spiralgen.Rd
VBmix/man/pcapen.Rd
VBmix/man/getCouple.Rd
VBmix/man/imglabels.Rd
VBmix/man/imgnames.Rd
VBmix/man/reBuild.Rd
VBmix/man/isNonVoid.Rd
VBmix/man/pca.Rd
VBmix/man/handlab.Rd
VBmix/man/sampleClassif.Rd
VBmix/man/plotGmm.Rd
VBmix/man/gdist.Rd
VBmix/man/mySmoothScatter.Rd
VBmix/man/rDirichlet.Rd
VBmix/man/getLabels.Rd
VBmix/man/gmmpen.Rd
VBmix/man/getBic.Rd
VBmix/man/constrClassif.Rd
VBmix/man/getColor.Rd
VBmix/man/jsut.Rd
VBmix/man/ZtoLabels.Rd
VBmix/man/dat2sample.Rd
VBmix/man/irisdata.Rd
VBmix/man/gmmkmsock.Rd
VBmix/man/covgen.Rd
VBmix/man/jsmc.Rd
VBmix/man/pendat.Rd
VBmix/man/generate2Dtransform.Rd
VBmix/man/displayNnet.Rd
VBmix/man/mymvn2plot.Rd
VBmix/man/appendToMppca.Rd
VBmix/man/displaySVM.Rd
VBmix/man/displayScatter.Rd
VBmix/man/subVarbayes.Rd
VBmix/man/mppca.Rd
VBmix/man/getVarbayesResp.Rd
VBmix/man/circlegen.Rd
VBmix/man/multinomial.Rd
VBmix/man/appendToList.Rd
VBmix/man/imgmods.Rd
VBmix/man/dDirichlet.Rd
VBmix/man/incremMerge.Rd
VBmix/man/dat1sample.Rd