VPdtw: Variable Penalty Dynamic Time Warping

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Variable Penalty Dynamic Time Warping for aligning GC-MS chromatograms to a master signal and more. With the appropriate penalty this method performs good alignment without altering the shape of peaks in GC-MS data.

Author
David Clifford, Glenn Stone
Date of publication
2015-07-08 05:13:01
Maintainer
David Clifford <David.Clifford+CRAN@gmail.com>
License
GPL-2
Version
2.1-11

View on CRAN

Man pages

dilation
Compute a morphological dilation of a signal
reference
GC-MS Chromatogram
VPdtw
Variable Penalty Dynamic Time Warping function

Files in this package

VPdtw
VPdtw/inst
VPdtw/inst/CITATION
VPdtw/src
VPdtw/src/matrix.cc
VPdtw/src/dtwwrap.cc
VPdtw/src/bandmatrix.h
VPdtw/src/AdtwBand.cc
VPdtw/src/dilation.c
VPdtw/src/bandmatrix.cc
VPdtw/src/extra.h
VPdtw/src/matrix.h
VPdtw/NAMESPACE
VPdtw/data
VPdtw/data/query.RData
VPdtw/data/reference.RData
VPdtw/R
VPdtw/R/dilation.R
VPdtw/R/signalMatchABand.R
VPdtw/R/plot.VPdtw.R
VPdtw/R/VPdtw.R
VPdtw/MD5
VPdtw/DESCRIPTION
VPdtw/man
VPdtw/man/reference.Rd
VPdtw/man/VPdtw.Rd
VPdtw/man/dilation.Rd