VariABEL: Testing of Genotypic Variance Heterogeneity to Detect Potentially Interacting SNP

Presence of interaction between a SNP and another SNP (or another factor) can result in heterogeneity of variance between the genotypes of an interacting SNP. Detecting such heterogeneity gives prior knowledge for constructing a genetic model underlying complex trait.

Author
Maksim Struchalin
Date of publication
2016-07-12 07:39:13
Maintainer
Maksim Struchalin <m.v.struchalin@mail.ru>
License
GPL (>= 2)
Version
0.9-2.1

View on CRAN

Man pages

var_test_gwaa
Function performs comparison of genotypic variances.

Files in this package

VariABEL
VariABEL/src
VariABEL/src/AbstractMatrix_R.cpp
VariABEL/src/Makevars
VariABEL/src/linear_regression.cpp
VariABEL/src/RealHandlerWrapper.cpp
VariABEL/src/constants.h
VariABEL/src/linear_regression.h
VariABEL/src/AbstractMatrix.cpp
VariABEL/src/var_homogeneity_tests.h
VariABEL/src/Transposer.h
VariABEL/src/FileVector.cpp
VariABEL/src/supplementary_functions.cpp
VariABEL/src/var_homogeneity_test_C.cpp
VariABEL/src/ReusableFileHandle.cpp
VariABEL/src/var_meta_gwaa_C.cpp
VariABEL/src/frutil.cpp
VariABEL/src/dautil.cpp
VariABEL/src/Rstuff.h
VariABEL/src/frversion.h
VariABEL/src/frutil.h
VariABEL/src/FileVector.h
VariABEL/src/Logger.h
VariABEL/src/CastUtils.cpp
VariABEL/src/gtps_container.cpp
VariABEL/src/dautil.h
VariABEL/src/ReusableFileHandle.h
VariABEL/src/inverse_variance_metaanalysis.cpp
VariABEL/src/FilteredMatrix.cpp
VariABEL/src/FilteredMatrix_R.cpp
VariABEL/src/iterator.cpp
VariABEL/src/var_homogeneity_tests.cpp
VariABEL/src/const.h
VariABEL/src/iterator_functions.h
VariABEL/src/AbstractMatrix.h
VariABEL/src/CastUtils.h
VariABEL/src/RealHandlerWrapper.h
VariABEL/src/Logger.cpp
VariABEL/src/convert_util.h
VariABEL/src/Transposer.cpp
VariABEL/src/iterator_functions.cpp
VariABEL/src/Makevars.win
VariABEL/src/supplementary_functions.h
VariABEL/src/convert_util.cpp
VariABEL/src/iterator.h
VariABEL/src/FilteredMatrix.h
VariABEL/src/ch2inv.f
VariABEL/src/gtps_container.h
VariABEL/src/inverse_variance_metaanalysis.h
VariABEL/NAMESPACE
VariABEL/R
VariABEL/R/var.meta.gwaa.R
VariABEL/R/var_test_gwaa.R
VariABEL/R/zzz.R
VariABEL/MD5
VariABEL/DESCRIPTION
VariABEL/man
VariABEL/man/var_test_gwaa.Rd