WeightedCluster: Clustering of Weighted Data

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The WeightedCluster library provides functions to cluster states sequences and weighted data. These functionalities include aggregating replicated cases, an optimized weighted PAM algorithm, function computing cluster quality measures for a range of clustering solutions and miscellaneous functions to plot clustering solutions of state sequences.

Author
Matthias Studer [aut, cre]
Date of publication
2014-01-19 14:22:57
Maintainer
Matthias Studer <matthias.studer@unige.ch>
License
GPL (>= 2)
Version
1.2
URLs

View on CRAN

Man pages

as.clustrange
Build a clustrange object to compare different clustering...
as.seqtree
Convert a hierarchical clustering object to a seqtree object.
clusterquality
Cluster quality statistics
kmedoids
K-Medoids or PAM clustering of weighted data.
kmedrange
Compute 'wcKMedoids' clustering for different number of...
seqclustname
Automatic labeling of cluster using sequence medoids
wcAggregateCases
Aggregate identical cases.
wcCmpCluster
Automatic comparison of clustering methods.
wcSilhouetteObs
Compute the silhouette of each object using weighted data.

Files in this package

WeightedCluster
WeightedCluster/inst
WeightedCluster/inst/CITATION
WeightedCluster/inst/doc
WeightedCluster/inst/doc/WeightedClusterFR.R
WeightedCluster/inst/doc/WeightedCluster.pdf
WeightedCluster/inst/doc/WeightedClusterPreview.pdf
WeightedCluster/inst/doc/WeightedClusterFR.pdf
WeightedCluster/inst/doc/WeightedClusterPreview.Rnw
WeightedCluster/inst/doc/WeightedClusterFR.Rnw
WeightedCluster/inst/doc/WeightedClusterPreview.R
WeightedCluster/inst/doc/WeightedCluster.R
WeightedCluster/inst/doc/WeightedCluster.Rnw
WeightedCluster/tests
WeightedCluster/tests/typic_analysis.R
WeightedCluster/tests/onecluster.R
WeightedCluster/src
WeightedCluster/src/kmedoidbase.h
WeightedCluster/src/PAMonce.h
WeightedCluster/src/PAM.h
WeightedCluster/src/kmedoid.h
WeightedCluster/src/kmedoidbase.cpp
WeightedCluster/src/clusterquality.cpp
WeightedCluster/src/kmedoidbody.cpp
WeightedCluster/src/PAM.cpp
WeightedCluster/src/PAMonce.cpp
WeightedCluster/src/kmedoidbasebody.cpp
WeightedCluster/src/cluster.h
WeightedCluster/src/clusterqualitybody.cpp
WeightedCluster/src/kmedoid.cpp
WeightedCluster/src/cluster.cpp
WeightedCluster/src/PAMoncebody.cpp
WeightedCluster/NAMESPACE
WeightedCluster/NEWS
WeightedCluster/R
WeightedCluster/R/clustrangefamily.R
WeightedCluster/R/kmedrange.R
WeightedCluster/R/aggregatecases.R
WeightedCluster/R/seqclustname.R
WeightedCluster/R/kmedoids.R
WeightedCluster/R/clusterquality.R
WeightedCluster/R/zzz.R
WeightedCluster/R/as.seqtree.R
WeightedCluster/vignettes
WeightedCluster/vignettes/randB.RData
WeightedCluster/vignettes/wardtree.png
WeightedCluster/vignettes/seqtree.png
WeightedCluster/vignettes/WeightedClusterPreview.Rnw
WeightedCluster/vignettes/WeightedClusterFR.Rnw
WeightedCluster/vignettes/previewhctree.png
WeightedCluster/vignettes/manual.bib
WeightedCluster/vignettes/WeightedCluster.Rnw
WeightedCluster/MD5
WeightedCluster/build
WeightedCluster/build/vignette.rds
WeightedCluster/DESCRIPTION
WeightedCluster/man
WeightedCluster/man/as.clustrange.Rd
WeightedCluster/man/wcAggregateCases.Rd
WeightedCluster/man/as.seqtree.Rd
WeightedCluster/man/kmedoids.Rd
WeightedCluster/man/seqclustname.Rd
WeightedCluster/man/clusterquality.Rd
WeightedCluster/man/kmedrange.Rd
WeightedCluster/man/wcSilhouetteObs.Rd
WeightedCluster/man/wcCmpCluster.Rd