xSimplifyNet: Function to simplify networks from an igraph object

In XGR: Exploring Genomic Relations for Enhanced Interpretation Through Enrichment, Similarity, Network and Annotation Analysis

Description

xSimplifyNet is supposed to simplify networks from an igraph object by keeping root-tip shortest paths only.

Usage

xSimplifyNet(g, verbose = TRUE)

Arguments

g	an "igraph" object
verbose	logical to indicate whether the messages will be displayed in the screen. By default, it sets to true for display

Value

an object of class "igraph"

Note

none

See Also

xSimplifyNet

Examples

## Not run: 
# Load the library
library(XGR)

## End(Not run)

RData.location <- "http://galahad.well.ox.ac.uk/bigdata"
## Not run: 
g <- xRDataLoader(RData.customised='ig.DO',
RData.location=RData.location)
ig <- xSimplifyNet(g)

## End(Not run)

XGR documentation built on Jan. 8, 2020, 5:06 p.m.