ped: A Standard Linkage Pedigree File
In XHWE: X Chromosome Hardy-Weinberg Equilibrium

Description Usage Format Details Examples

The first 5 columns give the pedigree id, individual id, father id (0 if founder), mother id (0 if founder), and sex (1=male, 2=female, 0=unknown), in that order. Note that these fields need to be numeric. The 6th column is the affection status (1 = unaffected, 2 = affected). From the 7th column, every consecutive two columns are the alleles at a SNP marker. For males, these two alleles at a SNP marker are the same, because males have only one X chromosome.

1	data("ped")

A data frame with 1000 observations on the following 10 variables.

FamID: The pedigree id.
IID: The individual id.
FID: The father id.
MID: The mother id.
gender: The sex of the individual.
Status: The affection status.
SNP1_1: The allele at a SNP1 marker.
SNP1_2: The allele at a SNP1 marker.
SNP2_1: The allele at a SNP2 marker.
SNP2_2: The allele at a SNP2 marker.

The first 5 columns give the pedigree id, individual id, father id (0 if founder), mother id (0 if founder), and sex (1=male, 2=female, 0=unknown), in that order. Note that these fields need to be numeric. The 6th column is the affection status (1 = unaffected, 2 = affected). From the 7th column, every consecutive two columns are the alleles at a SNP marker. For males, these two alleles at a SNP marker are the same, because males have only one X chromosome.