kostic.x: Data set for ZIBBSeqDiscovery

In ZIBBSeqDiscovery: Zero-Inflated Beta-Binomial Modeling of Microbiome Count Data

Description

Data set for ZIBBSeqDiscovery. The data set kostic.x is a count matrix with 2505 OTUs and 185 samples randomly selected from a real microbiome data set kostic.

Usage

data("kostic.x")

References

Kostic, A. D., Gevers, D., Pedamallu, C. S., Michaud, M., Duke, F., Earl, A. M., Ojesina, A. I., Jung, J., Bass, A. J., Tabernero, J., et al. (2012). Genomic analysis identifies association of fusobacterium with colorectal carcinoma. Genome research 22, 292-298.

Examples

## load the data
data(kostic.x)
dim(kostic.x)

Example output

[1] 2505  185

ZIBBSeqDiscovery documentation built on May 2, 2019, 4:21 a.m.