Man pages for ZetaSuite
Analyze High-Dimensional High-Throughput Dataset and Quality Control Single-Cell RNA-Seq
| countMat | Subsampled data from in-house HTS2 screening for global... |
| countMatSC | The cell x gene matrix from single-cell RNA-seq. |
| EventCoverage | Generation of Zeta Plot. |
| FDRcutoff | Find a cut-off according to screen strength. |
| negGene | Input negative file. |
| nonExpGene | Input internal negative control file. |
| posGene | Input positive file. |
| QC | Quality control of input datasets. |
| SVM | Find a SVM curve to separate positive and negative controls. |
| SVMcurve | The SVM curve lines in Zeta-plot. |
| Zeta | Calculation of zeta and weighted zeta score. |
| ZetaSuitSC | Calculation of zeta score for single cell RNA-seq. |
| Zscore | Z-transformation for input matrix. |
| ZseqList | The bin size for Zeta calculation. |
