countMatSC: The cell x gene matrix from single-cell RNA-seq.

In ZetaSuite: Analyze High-Dimensional High-Throughput Dataset and Quality Control Single-Cell RNA-Seq

The cell x gene matrix from single-cell RNA-seq.

Description

A scRNA-seq dataset generated from placenta that has been analyzed with CellRanger and used to develop EmptyDrops. We have subsampled the genes from the real datasets to generated the matrix.

Usage

data("countMatSC")

Format

A data frame with 1090 cells and 10000 genes. This is the subset of data obtained from single-cell RNAseq for package testing. Each row represents one cell detected in single-cell RNA-seq, each column is one gene in detected cells. The values in the matrix are the raw read counts from single-cell RNAseq.

A data frame with 1090 cells and 10000 genes.This is the subset of data obtained from single-cell RNAseq for package testing.

Details

This data frame is the generated by single-cell RNA-seq.

Examples

  data(countMatSC)

ZetaSuite documentation built on May 25, 2022, 9:05 a.m.