activity: Animal Activity Statistics

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Provides functions to fit kernel density functions to animal activity time data; plot activity distributions; quantify overall levels of activity; statistically compare activity metrics through bootstrapping; and evaluate variation in linear variables with time (or other circular variables).

Author
Marcus Rowcliffe <marcus.rowcliffe@ioz.ac.uk>
Date of publication
2016-09-26 08:03:36
Maintainer
Marcus Rowcliffe <marcus.rowcliffe@ioz.ac.uk>
License
GPL-3
Version
1.1

View on CRAN

Man pages

activity
Animal activity statistics
actmod-class
Activity model class.
BCIspeed
Animal speed data
BCItime
Animal record time of day data
bwcalc
Calculate circular kernel bandwidth.
compareAct
Compare activity level estimates
compareCkern
Compare circular distributions.
compareTimes
Compare activity across between times of day
dvmkern
Circular kernel probability density function.
fitact
Fit activity model to time-of-day data
fitlincirc
Linear-circular regression
lincircKern
Linear-circular kernel fit
lincircmod-class
An S4 class describing linear-circular relationships.
plot-actmod-methods
Plot activity distribution
plot-lincircmod-methods
Plot linear-circular relationship
rvmkern
Random circular kernel numbers.
show-actmod-method
Show activity level estimate
yfromx
Impute empirical circular distribution.

Files in this package

activity
activity/NAMESPACE
activity/data
activity/data/BCItime.rda
activity/data/BCIspeed.rda
activity/R
activity/R/activity_code_1_1.r
activity/MD5
activity/DESCRIPTION
activity/man
activity/man/plot-lincircmod-methods.Rd
activity/man/compareTimes.Rd
activity/man/show-actmod-method.Rd
activity/man/bwcalc.Rd
activity/man/lincircmod-class.Rd
activity/man/rvmkern.Rd
activity/man/fitlincirc.Rd
activity/man/BCItime.Rd
activity/man/compareAct.Rd
activity/man/compareCkern.Rd
activity/man/dvmkern.Rd
activity/man/fitact.Rd
activity/man/plot-actmod-methods.Rd
activity/man/activity.Rd
activity/man/BCIspeed.Rd
activity/man/lincircKern.Rd
activity/man/yfromx.Rd
activity/man/actmod-class.Rd