adaptsmoFMRI: Adaptive Smoothing of FMRI Data

This package contains R functions for estimating the blood oxygenation level dependent (BOLD) effect by using functional Magnetic Resonance Imaging (fMRI) data, based on adaptive Gauss Markov random fields, for real as well as simulated data. The implemented simulations make use of efficient Markov Chain Monte Carlo methods.

Author
Max Hughes
Date of publication
2013-01-19 16:27:49
Maintainer
Max Hughes <hughesgm@me.com>
License
GPL-2
Version
1.1

View on CRAN

Man pages

adaptiveGMRF
Adaptive GMRF Model (Real Data)
adaptiveGMRF2COVAR
Adaptive GMRF Model (Real Data)
adaptsmoFMRI-package
Adaptive Smoothing of FMRI Data
sim.adaptiveGMRF
Adaptive GMRF Model for Simulated Data
sim.adaptiveGMRF2COVAR
Adaptive GMRF Model for Simulated Data
sim_fmri
Simulated FMRI Data Set (for one covariate)
sim.fmri
Simulate FMRI Data
sim_fmri_2covar
Simulated FMRI Data Set (for two covariates)
sim.fmri2COVAR
Simulate FMRI Data
sim.weightsplot
Plot Function for Weights (Simulated Data)
weightsplot
Plot Function for Weights (Real Data)

Files in this package

adaptsmoFMRI
adaptsmoFMRI/MD5
adaptsmoFMRI/R
adaptsmoFMRI/R/sim-fmri.R
adaptsmoFMRI/R/sim-fmri-2covar.R
adaptsmoFMRI/R/sim-adaptive-gmrf.R
adaptsmoFMRI/R/sim-adaptive-gmrf-2covar.R
adaptsmoFMRI/R/plot-weights-sim.R
adaptsmoFMRI/R/plot-weights-real.R
adaptsmoFMRI/R/adaptive-gmrf.R
adaptsmoFMRI/R/adaptive-gmrf-2covar.R
adaptsmoFMRI/NAMESPACE
adaptsmoFMRI/man
adaptsmoFMRI/man/weightsplot.Rd
adaptsmoFMRI/man/sim_fmri_2covar.Rd
adaptsmoFMRI/man/sim_fmri.Rd
adaptsmoFMRI/man/sim.weightsplot.Rd
adaptsmoFMRI/man/sim.fmri2COVAR.Rd
adaptsmoFMRI/man/sim.fmri.Rd
adaptsmoFMRI/man/sim.adaptiveGMRF2COVAR.Rd
adaptsmoFMRI/man/sim.adaptiveGMRF.Rd
adaptsmoFMRI/man/adaptsmoFMRI-package.Rd
adaptsmoFMRI/man/adaptiveGMRF2COVAR.Rd
adaptsmoFMRI/man/adaptiveGMRF.Rd
adaptsmoFMRI/DESCRIPTION
adaptsmoFMRI/data
adaptsmoFMRI/data/sim_fmri_2covar.RData
adaptsmoFMRI/data/sim_fmri.RData
adaptsmoFMRI/data/datalist