adwave: Wavelet Analysis of Genomic Data from Admixed Populations

Implements wavelet-based approaches for describing population admixture. Principal Components Analysis (PCA) is used to define the population structure and produce a localized admixture signal for each individual. Wavelet summaries of the PCA output describe variation present in the data and can be related to population-level demographic processes. For more details, see J Sanderson, H Sudoyo, TM Karafet, MF Hammer and MP Cox. 2015. Reconstructing past admixture processes from local genomic ancestry using wavelet transformation. Genetics 200:469-481 <doi:10.1534/genetics.115.176842>.

Getting started

Package details

AuthorJean Sanderson
MaintainerMurray Cox <[email protected]>
LicenseGPL (>= 2)
Version1.3
URL https://doi.org/10.1534/genetics.115.176842
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("adwave")

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adwave documentation built on May 17, 2018, 5:03 p.m.