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agvgd: An R Implementation of the 'Align-GVGD' Method
'Align-GVGD' ('A-GVGD') is a method to predict the impact of 'missense' substitutions based on the properties of amino acid side chains and protein multiple sequence alignments <doi:10.1136/jmg.2005.033878>. 'A-GVGD' is an extension of the original 'Grantham' distance to multiple sequence alignments. This package provides an alternative R implementation to the web version found on <http://agvgd.hci.utah.edu/>.
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Package details |
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| Author | Ramiro Magno [aut, cre] (<https://orcid.org/0000-0001-5226-3441>), Isabel Duarte [aut] (<https://orcid.org/0000-0003-0060-2936>), Ana-Teresa Maia [aut] (<https://orcid.org/0000-0002-0454-9207>), CINTESIS [cph, fnd] |
| Maintainer | Ramiro Magno <ramiro.magno@gmail.com> |
| License | MIT + file LICENSE |
| Version | 0.1.2 |
| URL | https://maialab.org/agvgd/ https://github.com/maialab/agvgd |
| Package repository | View on CRAN |
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