agvgd-package: agvgd: An R Implementation of the 'Align-GVGD' Method

In agvgd: An R Implementation of the 'Align-GVGD' Method

agvgd: An R Implementation of the 'Align-GVGD' Method

Description

'Align-GVGD' ('A-GVGD') is a method to predict the impact of 'missense' substitutions based on the properties of amino acid side chains and protein multiple sequence alignments doi: 10.1136/jmg.2005.033878. 'A-GVGD' is an extension of the original 'Grantham' distance to multiple sequence alignments. This package provides an alternative R implementation to the web version found on http://agvgd.hci.utah.edu/.

Author(s)

Maintainer: Ramiro Magno [e-mail] (ORCID)

Authors:

• Isabel Duarte [e-mail] (ORCID)

• Ana-Teresa Maia [e-mail] (ORCID)

Other contributors:

• CINTESIS [copyright holder, funder]

See Also

Useful links:

• https://maialab.org/agvgd/

• https://github.com/maialab/agvgd

• Report bugs at https://github.com/maialab/agvgd/issues

agvgd documentation built on Sept. 11, 2022, 1:07 a.m.