Schema-class | R Documentation |
Schema
defines a common data structure for AIRR Data Representation
standards.
## S4 method for signature 'Schema'
names(x)
## S4 method for signature 'Schema,character'
x[i]
## S4 method for signature 'Schema'
x$name
InfoSchema
DataFileSchema
AlignmentSchema
RearrangementSchema
RepertoireSchema
GermlineSetSchema
GenotypeSetSchema
AIRRSchema
x |
|
i |
field name. |
name |
field name. |
A Schema
object.
An object of class Schema
of length 1.
An object of class Schema
of length 1.
An object of class Schema
of length 1.
An object of class Schema
of length 1.
An object of class Schema
of length 1.
An object of class Schema
of length 1.
An object of class Schema
of length 1.
An object of class list
of length 26.
The following predefined Schema objects are defined:
InfoSchema
: AIRR Info Schema
.
DataFileSchema
: AIRR DataFile Schema
.
AlignmentSchema
: AIRR Alignment Schema
.
RearrangementSchema
: AIRR Rearrangement Schema
.
RepertoireSchema
: AIRR Repertoire Schema
.
GermlineSetSchema
: AIRR GermlineSet Schema
.
GenotypeSetSchema
: AIRR GenotypeSet Schema
.
AIRRSchema
: named list containing all non-experimental
AIRR Schema
objects.
definition
name of the schema definition.
required
character
vector of required fields.
optional
character
vector of non-required fields.
properties
list
of field definitions.
info
list
schema information.
See load_schema for loading a Schema
from the definition set.
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