Man pages for algaeClassify
Determine Phytoplankton Functional Groups Based on Functional Traits

accumSplit a dataframe column with binomial name into genus and...
algae_searchCompare a genus and species name against the algaebase online...
bestmatchfuzzy partial matching between a scientific name and a list...
date_matTransform a phytoplankton timeseries into a matrix of...
genus_species_extractSplit a dataframe column with binomial name into genus and...
lakegenevaexample dataset from lake Geneva, Switzerland
mean_naomitCompute mean value while ignoring NA's
phyto_ts_aggregateAggregate phytoplankton timeseries based on abundance. Up to...
sampeffVisually assess change in sampling effort over time (author:...
spp_list_algaebaseWrapper for applying algae_search function to a data.frame...
traitrangessurface/volume ratio and max linear dimension criteria for...
traits_to_csrAssign phytoplankton species to CSR functional groups, based...
traits_to_csr_dfAdd CSR functional group classifications to a dataframe of...
traits_to_mfgAssign MFG based on binary functional traits and taxonomy...
traits_to_mfg_dfAssign morphofunctional groups to a dataframe of functional...
algaeClassify documentation built on Sept. 15, 2019, 1:03 a.m.