rescale_transform: Transform Intensities

In alkahest: Pre-Processing XY Data from Experimental Methods

Transform Intensities

Description

Transform Intensities

Usage

rescale_transform(x, y, ...)

## S4 method for signature 'numeric,numeric'
rescale_transform(x, y, f, ...)

## S4 method for signature 'ANY,missing'
rescale_transform(x, f, ...)

Arguments

x, y	A numeric vector. If y is missing, an attempt is made to interpret x in a suitable way (see grDevices::xy.coords()).
...	Extra arguments to be passed to f.
f	A function that takes a numeric vector of intensities as argument and returns a numeric vector.

Details

Transformation of intensities can be used to improve the identification of peaks with a low signal-to-noise ratio.

Value

Returns a list with two components x and y.

Author(s)

N. Frerebeau

See Also

Other normalization methods: rescale_area(), rescale_range(), rescale_snv(), rescale_total()

Examples

## gamma-ray spectrometry
data("BEGe")

## Subset from 2.75 to 200 keV
BEGe <- signal_select(BEGe, from = 3, to = 200)

## Plot spectrum
plot(BEGe, type = "l", xlab = "Energy (keV)", ylab = "Count")

## Transform intensities
BEGe_trans <- rescale_transform(BEGe, f = sqrt)
plot(BEGe_trans, type = "l", xlab = "Energy (keV)", ylab = "sqrt(Count)")

alkahest documentation built on April 3, 2025, 8:52 p.m.