anovir: Analysis of Virulence

Epidemiological population dynamics models traditionally define a pathogen's virulence as the increase in the per capita rate of mortality of infected hosts due to infection. This package provides functions allowing virulence to be estimated by maximum likelihood techniques. The approach is based on the analysis of relative survival comparing survival in matching cohorts of infected vs. uninfected hosts (Agnew 2019) <doi:10.1101/530709>.

Package details

AuthorPhilip Agnew [aut, cre], Jimmy Lopez [aut]
MaintainerPhilip Agnew <philip.agnew@ird.fr>
LicenseGPL-3
Version0.1.0
URL https://www.biorxiv.org/content/10.1101/530709v1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("anovir")

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anovir documentation built on Oct. 24, 2020, 9:08 a.m.