Files in antedep
Antedependence Models for Longitudinal Data
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/simulate_gau.R
R/fit_inad.R
R/lrt_stationarity_inad.R
R/lrt_homogeneity_inad.R
R/loglik_gau.R
R/bic_cat.R
R/ci_inad.R
R/data-cattle_growth.R
R/loglik_inad.R
R/inad-import.R
R/fit_gau_em.R
R/logL_gau_missing.R
R/ci_gau.R
R/data-race_100km.R
R/lrt_stationarity_cat.R
R/lrt_homogeneity_cat.R
R/lrt_order_inad.R
R/em_inad.R
R/lrt_order_gau.R
R/inad_utils.R
R/lrt_mean_gau.R
R/loglik_cat.R
R/ci_cat.R
R/em_gau.R
R/data-bolus_inad.R
R/cat_test_stats.R
R/diagnostics.R
R/lrt_stationarity_gau.R
R/lrt_order_cat.R
R/simulate_inad.R
R/cat_utils.R
R/bell.R
R/em_cat.R
R/fit_cat.R
R/data-cochlear_implant.R
R/fit_gau.R
R/lrt_homogeneity_gau.R
R/bic_gau.R
R/bic_inad.R
R/simulate_cat.R
R/missing_utils.R
R/gau_utils.R
R/data-labor_force_cat.R
inst/WORDLIST
inst/doc/antedep-intro.Rmd
inst/doc/antedep-intro.html
inst/doc/antedep-intro.R
build/vignette.rds
tests/testthat.R
tests/testthat/test-simulate_inad.R
tests/testthat/test-aic_gau.R
tests/testthat/test-em-gau-wrapper.R
tests/testthat/test-loglik_inad.R
tests/testthat/test-lrt_homogeneity_inad.R
tests/testthat/test-missing_gau.R
tests/testthat/test-bic_gau.R
tests/testthat/test-stationarity_ci_cat.R
tests/testthat/test-simulate_gau.R
tests/testthat/test-bell.R
tests/testthat/test-lrt_homogeneity_gau.R
tests/testthat/test-lrt_cat.R
tests/testthat/test-lrt_stationarity_gau.R
tests/testthat/test-logL_cat.R
tests/testthat/test-aic-inad.R
tests/testthat/test-inference-missing-data-guards.R
tests/testthat/test-ci-gau.R
tests/testthat/test-datasets-added.R
tests/testthat/test-logL_gau.R
tests/testthat/Rplots.pdf
tests/testthat/test-bic-inad.R
tests/testthat/test-fit_gau.R
tests/testthat/test-gau-order-alias.R
tests/testthat/test-ci-inad.R
tests/testthat/test-diagnostics.R
tests/testthat/test-em-inad.R
tests/testthat/test-cat.R
tests/testthat/test-fit_inad.R
tests/testthat/test-em-cat.R
vignettes/antedep-intro.Rmd
data/labor_force_cat.rda
data/bolus_inad.rda
data/race_100km.rda
data/cattle_growth.rda
data/cochlear_implant.rda
man/print.gau_bic_order.Rd
man/dot-inad_subject_ll_order0.Rd
man/dot-expected_counts_to_cell_counts_cat_em.Rd
man/run_stationarity_tests_gau.Rd
man/dot-fit_cat_timeinvariant_single.Rd
man/dot-prism_residuals.Rd
man/dot-safeguard_update_cat_em.Rd
man/print.cat_lrt.Rd
man/test_homogeneity_gau.Rd
man/fit_gau.Rd
man/dot-bell_theta_from_mean.Rd
man/dot-inad_order2_dist.Rd
man/dot-default_transition_cat.Rd
man/summary.cat_ci.Rd
man/dot-count_cells_cat.Rd
man/dot-loglik_contribution.Rd
man/dot-unpack_alpha.Rd
man/dot-mle_mean_gau.Rd
man/print.inad_ci.Rd
man/dot-logL_subject_cat_marginalize_p1.Rd
man/dot-group_means_gau.Rd
man/dot-bell_mean_from_theta.Rd
man/test_stationarity_gau.Rd
man/dot-build_gau_covariance.Rd
man/dot-pack_cat_params.Rd
man/logL_inad_i.Rd
man/print.cat_ci.Rd
man/dot-compute_marginal_ci.Rd
man/dot-count_params_cat.Rd
man/simulate_cat.Rd
man/dot-inad_make_thin_pmf.Rd
man/simulate_gau.Rd
man/ci_cat.Rd
man/test_order_cat.Rd
man/dot-compute_transition_ci.Rd
man/dot-uniform_cat_params.Rd
man/print.gau_ci.Rd
man/bic_inad.Rd
man/simulate_inad.Rd
man/dot-em_e_step_gau.Rd
man/race_100km.Rd
man/dot-logL_inad_missing.Rd
man/dot-logL_from_counts_cat.Rd
man/dot-get_history.Rd
man/print.gau_fit.Rd
man/dot-logL_subject_cat_observed.Rd
man/test_order_gau.Rd
man/dot-log_sum_exp.Rd
man/test_stationarity_inad.Rd
man/bic_order_cat.Rd
man/dot-fit_cat_stationary_single.Rd
man/plot_profile.Rd
man/em_cat.Rd
man/dot-fit_cat_single_pop.Rd
man/run_homogeneity_tests_inad.Rd
man/dot-innovation_var_gau.Rd
man/summary.inad_ci.Rd
man/dot-construct_gau_covariance.Rd
man/dot-initialize_gau_marginal.Rd
man/dot-fit_cat_stationary.Rd
man/dot-cat_theta_to_prob.Rd
man/test_homogeneity_cat.Rd
man/em_inad.Rd
man/print.cat_fit.Rd
man/dot-inad_state_max.Rd
man/dot-inad_effective_innovation_mean.Rd
man/dot-fit_gau_em.Rd
man/dot-rss_gau.Rd
man/print.inad_fit.Rd
man/dot-partial_corr_gau.Rd
man/dot-fit_inad_heterogeneous.Rd
man/labor_force_cat.Rd
man/dot-inad_conv_trunc.Rd
man/logL_inad.Rd
man/aic_inad.Rd
man/bic_gau.Rd
man/run_order_tests_cat.Rd
man/dot-logL_subject_cat_marginalize_p2.Rd
man/Bell.Rd
man/cochlear_implant.Rd
man/dot-inad_subject_ll_order2.Rd
man/ci_inad.Rd
man/dot-counts_to_transition_probs.Rd
man/dot-poster_general.Rd
man/dot-get_combinations_cat.Rd
man/dot-logL_gau_missing.Rd
man/dot-fit_cat_timeinvariant.Rd
man/dot-inad_build_transitions.Rd
man/test_timeinvariance_cat.Rd
man/dot-unpack_cat_params.Rd
man/print.gau_order_test.Rd
man/dot-thin_vec.Rd
man/dot-default_marginal_cat.Rd
man/dot-simulate_subject_cat.Rd
man/dot-psi_kenward.Rd
man/dot-rss_two_sample_gau.Rd
man/dot-ci_wald_i_louis_fe.Rd
man/bic_cat.Rd
man/dot-safe_log.Rd
man/dot-validate_y_cat.Rd
man/aic_cat.Rd
man/dot-louis_info_i_fe.Rd
man/bolus_inad.Rd
man/dot-initialize_gau_em.Rd
man/dot-extract_conditional_probs.Rd
man/ci_gau.Rd
man/dot-history_to_index.Rd
man/logL_cat.Rd
man/bic_order_gau.Rd
man/print.homogeneity_tests_inad.Rd
man/aic_gau.Rd
man/em_gau.Rd
man/dot-inad_subject_ll_order1.Rd
man/dot-em_m_step_gau.Rd
man/dot-fit_cat_single_pop_marginalize.Rd
man/plot_prism.Rd
man/test_homogeneity_inad.Rd
man/dot-rss_vector_gau.Rd
man/dot-count_cells_table_cat.Rd
man/test_stationarity_cat.Rd
man/dot-count_params_homogeneity.Rd
man/dot-logL_subject_cat.Rd
man/summary.gau_ci.Rd
man/Bz.Rd
man/dot-cat_prob_to_theta.Rd
man/test_contrast_gau.Rd
man/dot-partial_corr_matrix_gau.Rd
man/dot-counts_to_probs_cat.Rd
man/dot-blend_cat_params_em.Rd
man/dot-validate_blocks_cat.Rd
man/print.test_homogeneity_inad.Rd
man/logL_gau.Rd
man/dot-validate_params_cat.Rd
man/run_stationarity_tests_inad.Rd
man/test_two_sample_gau.Rd
man/fit_cat.Rd
man/print.gau_contrast_test.Rd
man/bic_order_inad.Rd
man/cattle_growth.Rd
man/print.gau_mean_test.Rd
man/dot-inad_effective_innovation_param.Rd
man/dot-ci_alpha_theta_louis_fe.Rd
man/partial_corr.Rd
man/run_stationarity_tests_cat.Rd
man/dot-logsumexp_cat.Rd
man/test_order_inad.Rd
man/dot-count_params_gau.Rd
man/fit_inad.Rd
man/dot-innov_vec.Rd
man/test_one_sample_gau.Rd
man/print.gau_homogeneity_test.Rd
