Nothing
asearchLocal()
. Now repo
is passed correctly to loadFromLocalRepo
(#333). https://raw.githubusercontent.com
is closed, this is why we need to update hooks to https://raw.githack.com
(#332). cache()
function due to (#327). Effect of the bytecompiler needs further research.saveToLocalRepo()
and saveToRepo()
have now additional parameter use_flocks
. If set up to TRUE
then flock
package is use to synchronize access to database (#322).asearchLocal()
and areadLocal()
that work as asearch()
and aread()
for selected local repositories (#298).force
has now different meaning in createLocalRepo()
. As suggested in (#319) and (#318) if forces to override existing backpack.db file.adigest()
allows to use different hash functions (#323)dbExecute()
is used instead of dbGetQuery()
as is recommended in latest version of DBI
package (#316).removeTagsRepo()
is added. It allows to remove specific tags from specific objects. Note that you cannot specify tags via regular expressions (to avoid some accidental deletes). You can always use getLocalTags()
to get list of available tags.createPostgresRepo()
and setPostgresRepo()
. Note, that it's still an experimental feature.default=FALSE
parameter. [#291]aread
and asearch
examples due to new version of ggplot2 - 2.2.0 [#296]asave
examples due to new version of ggplot2 - 2.2.0 [#300]aread()
, asearch()
, searchInLocalRepo()
and loadFromLocalRepo()
are now handling URL addresses as well. This may be useful to access artifacts generated by the shiny app.%a%
archives proper names of first object so does ahistory
prints proper name of archived artifact instead of env[[nm]]
. [#269]addHooksToPrint()
:
atrace()
function is added. It call trace()
function to store a selected object in the repository after each call to specified FUN (for example 'lm').restoreLibs()
can now restore libraries in custom directory. [#251createMDGallery
has new maxTags
parameter so that gallery's summaries in the README.md
files now has limited chunk's length. [#249]restoreLibs()
function is added. It recovers previous versions of R packages. Needed due to rapid changes in structure of ggplot2
objects. Now one can restore version of the ggplot2
package consistent with archived object.RemoteRepoCheck
is used to verify if parameters for remote repo are correct.asession
returns session info for given artifact (similar to aread).aformat
returns vector of formats in which the artifact is saved (similar to aread).saveToRepo
by default saves session info.repoDirGit
has changed name to subdir
and the default value is now '/'.repoType
parameter).alink
is now working with github and bitbucket repositories.asearch
returns named list of artifacts. MD5hashes are used as names.silent=TRUE
by default in saveToRepo
. Less warnings.saveToRepo
has now two copies, consistent with other names saveToLocalRepo
an short one asave
.archive
, cloneGitHubRepo
, createGitHubRepo
, (deleteGithubRepo
) deleteGitHubRepo
, (pushRepo
) pushGitHubRepo
, (pullRepo
) pullGitHubRepo
have been moved to separate archivist.github
package to maintain Local/Remote consistency. [#198].deleteRepo
was deprecated. Use deleteLocalRepo
createEmptyLocalRepo
and createEmptyRepo
were deprecated. Use createLocalRepo
.rmFromRepo
was deprecated. Use rmFromLocalRepo
multiSearchInLocalRepo
and it's remote version were deprecated. Now multiple patterns are available in searchInLocalRepo
/searchInRemoteRepo
. alink
function: Returns a Link To Download an Artifact Stored on GitHub Repository. Ideal combination with archive
pushRepo
function which add files, commits them and pushes from Local Repository
to synchronized GitHub one. [#146].pullRepo
pulls (git pull
) changes from remote GitHub Repository
to the corresponding Local one. [#146].deleteLocalRepo
(previous deleteRepo
) and deleteGithubRepo
. [#156].createGithubMDGallery
that give the markdown summary for each artifact in the repository. Ideal for README.md file. Example [#144]asearch
function enables a user to read artifacts from default GitHub repository. In the previous version it was possible only in default local repository.apotions('repo/repoDir', NULL, unset = TRUE)
[#176].New features:
?ahistory
, ?cache
, ?asearch
, ?archive
, ?cloneGithubRepo
, githubFunctions
, ?shinySearchInLocalRepo
, ?alink
documentation pages.asearch
completely new example section divided into 3 subsections: default local repository, default GitHub resository and Github repository.extractTags.lm
, extractTags.htest
. extractTags.lda
, extractTags.qda
, extractTags.survfit
, extractTags.glmnet
, extractTags.partition
.htest
object's data is now saved to repository as a list.devtoolss::session_info()
with an artifact during the execution of saveToRepo()
and archive()
[#184].format:
is now added to every artifact/miniature. Artifacts can be saved in different (and more than one) formats (rda/json/csv) what makes them easier to access from other languages.New and renamed parameters:
user.name
and user.password
parameters of archive
and createEmptyGithubRepo
were changed into user
and password
correspondingly.createEmptyGithubRepo
now can use repoDir
to specify in which directory the synchronized Local Repository should be created [#142]. archive
no longer cats hook to the artifact during the execution. Hook cat can be set with new alink
parameter that uses alink()
function, where parameters can be passed with ...
.deleteRepo
has now new unset
parameter that allows to unset global aoptions('repoDir', NULL, unset = TRUE)
when deleted repoDir
was a globally specified Repository [#157].cloneGithubRepo
from local_path
to repoDir
to maintain consistency within package documentation and name convention.createEmptyGithubRepo
, createEmptyRepo(type ='github')
and cloneGithubRepo
now reacts on new default
parameter which sets newly created/cloned repositories (GitHub and synchronized with it Local one) as default [#171 , #142].chain
parameter to value
in saveToRepo
function #101].aformat
parameter to format
in ahistory()
to maintain consistency with alink()
function.alink
. Now the repoDirGit
is supported.archivist
-like Repository
with createEmptyGithubRepo
function. We also added createEmptyLocalRepo
to maintain consistency with other sister functions. createEmptyRepo
is now a wrapper around createEmptyLocalRepo
and createEmptyGithubRepo
functions.cloneGithubRepo
function.archive
function. Example: https://github.com/MarcinKosinski/archive-test4/commits/master`?
archivist-github-integration`` (or shorter
?agithub`).splitTagsLocal
and splitTagsGithub
enabling to split tag
column in database into two separate columns: tagKey
and tagValue
.checkDirectory
function is now immune to directories that don't exist. This made
showLocalRepo
function working properly when passed an argument to the directory
that do not exist.dbDisconnect( conn )
call to the on.exit(dbDisconnect( conn ))
in executeSingleQuery
function to prevent a situation in which during an error inside a function (which might be produced), the connection stays open, when it shouldn`t.%a%
operator does react on default = TRUE
in createEmptyRepo
function.deleteRoot = TRUE
argument of the deleteRepo
function works properly and enables removing root directory of the Repository.rmFromRepo
's body:Repository
).
In case of wrong md5hash abbreviation a user will receive an error message.backpack.db
file when
many = TRUE
. They were not removed before.gallery
folder.
They were not removed before.Invisible(NULL)
is the result of the function evaluation.copy*Repo
's body:Invisible(NULL)
is the result of the function evaluationrepoFrom
parameter in copyLocalRepo
is set to NULL
as default.copyFromLocalRepo
and copyFromGithubRepo
copies only distinct records for table tag
and artifact
in backpack.db
file, that can be seen with show*Repo
and copies all mentioned artifacts for local version.downloadDB
in createEmptyRepo
function gives a user-friendly error.zipGithubRepo
unzipped file has the same name as zip file. Earlier it had a name of the temporary file that was difficult to notice.setGithubRepo
it is now possible to use repoDirGit parameter. Before there was wrong stopifnot
condition.paste0()
was replaced by file.path()
in appropriate places of function's bodies in the following R scripts: archive.R
, copyToRepo.R
, createEmptyRepo.R
, deleteRepo.R
,
extractMiniature.R
, loadFromRepo.R
, rmFromRepo.R
, saveToRepo.R
, zipRepo.R
.checkDirectory
's function body were removed due to changes in point 11.
checkDirectory2
was completely removed as it is unnecessary now.test_base_functionalities.R
due to changes in point 11 and 12.aoptions
for user
and repo
will work properly with showGithubRepo
and summaryGithubRepo
when set. It might have not been noticed in version 1.7, it might have been a bug that occured in the development between 1.7 and 1.8 version.print.ahistory
function can now print outputs of the artifact's history as the knitr::kable
would.searchInGithubRepo
now works for user='pbiecek'
and repo='archivist
parameters as we added new backpack.db file. The previous one was almost empty (for 7 months).loadFromRepo
function - Loading artifacts from the repository which is built in the archivist package and saving them on the example repository.createEmptyRepo
function - creating a default local Repository in non existing directory.rmFromRepo
function - removing artifacts with many = TRUE
argument.deleteRepo
function - using deleteRoot = TRUE
argument. copy*Repo
function - using graphGallery local repository in copyLocalRepo
function.get*Tags
function - additional example using getTagsLocal
function.aoptions
function - added two new examples concerning usage of silent
and repoDir
parameters in this function.?Tags
, ?Repository
, ?md5hash
, archivist-package
, ?saveToRepo
, loadFromRepo
, summaryRepo
, showRepo
, ?searchInRepo
, ?createEmptyRepo
, ?rmFromRepo
, ?deleteRepo
, copyToRepo
, zipRepo
, setRepo
, getTags
, addTagsRepo
, magrittr
, archivistOptions
, ?aread
documentation pages.?Repository
documentation page.tempdir()
was replaced by tempfile()
in examples sections of: ?addTagsRepo
, ?cache
, copyToRepo
, createEmptyRepo
, ?deleteRepo
, loadFromRepo
, ?rmFromRepo
, ?saveToRepo
, setRepo
, showRepo
, summaryRepo
, ?Tags
, zipRepo
documentation pages. tempdir
is existing directory in which R works so calling deleteRepo( exampleRepoDir, deleteRoot=TRUE)
removed important R files.zip*Repo
.Tags
in all functions there has been stated
such an order:Tags
in the text of function's documentation, examples' comments, then Tags
are considered as a proper name and they begin with capital letter.tags
in function's body, as parameters, as R object's attributes, then they begin with small letter.?addTagsRepo
, asearch
, ?cloneGithubRepo
, copy*Repo
, createEmptyLocalRepo
, getTags*
, loadFrom*Repo
, ?rmFromRepo
, ?saveToRepo
, searchIn*Repo
, set*Repo
, ?shinySearchInLocalRepo
, showRepo
, summary*Repo
, zip*Repo
ahistory has now 'artifact' argument instead of 'obj'
Added tests.
saveSetToRepo
with a new function loadSetFromRepo
to the github.com/pbiecek/archivist2
repository....should be updated...
...should be updated...
setLocalRepo
and setGithubRepo
functions.
...should be updated...Any scripts or data that you put into this service are public.
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