aster: Aster Models

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Aster models are exponential family regression models for life history analysis. They are like generalized linear models except that elements of the response vector can have different families (e. g., some Bernoulli, some Poisson, some zero-truncated Poisson, some normal) and can be dependent, the dependence indicated by a graphical structure. Discrete time survival analysis, zero-inflated Poisson regression, and generalized linear models that are exponential family (e. g., logistic regression and Poisson regression with log link) are special cases. Main use is for data in which there is survival over discrete time periods and there is additional data about what happens conditional on survival (e. g., number of offspring). Uses the exponential family canonical parameterization (aster transform of usual parameterization).

Author
Charles J. Geyer <charlie@stat.umn.edu>.
Date of publication
2015-07-17 19:58:13
Maintainer
Charles J. Geyer <charlie@stat.umn.edu>
License
MIT + file LICENSE
Version
0.8-31
URLs

View on CRAN

Man pages

anova.asterOrReaster
Analysis of Deviance for Reaster Model Fits
aphid
Life History Data on Uroleucon rudbeckiae
aster
Aster Models
chamae
Life History Data on Chamaecrista fasciculata
chamae2
Life History Data on Chamaecrista fasciculata
chamae3
Life History Data on Chamaecrista fasciculata
echin2
Life History Data on Echinacea angustifolia
echinacea
Life History Data on Echinacea angustifolia
families
Families for Aster Models
mlogl
Minus Log Likelihood for Aster Models
newpickle
Penalized Quasi-Likelihood for Aster Models
oats
Life History Data on Avena barbata
penmlogl
Penalized Minus Log Likelihood for Aster Models
pickle
Penalized Quasi-Likelihood for Aster Models
predict.aster
Predict Method for Aster Model Fits
quickle
Penalized Quasi-Likelihood for Aster Models
radish
Life History Data on Raphanus sativus
raster
Aster Model Simulation
reaster
Aster Models with Random Effects
sim
Simulated Life History Data
summary.aster
Summarizing Aster Model Fits
summary.reaster
Summarizing Aster Model with Random Effects Fits
transform
Transform between Aster Model Parameterizations
truncated
K-Truncated Distributions

Files in this package

aster
aster/inst
aster/inst/doc
aster/inst/doc/re.Rnw
aster/inst/doc/trunc.R
aster/inst/doc/design.tex
aster/inst/doc/design.pdf
aster/inst/doc/ktp.tex
aster/inst/doc/trunc.Rnw
aster/inst/doc/tutor.Rnw
aster/inst/doc/tutor.pdf
aster/inst/doc/ktp.pdf
aster/inst/doc/re.pdf
aster/inst/doc/tutor.R
aster/inst/doc/trunc.pdf
aster/tests
aster/tests/fampoi.R
aster/tests/famnzp.R
aster/tests/newfam.R
aster/tests/gradmat.R
aster/tests/aster.R
aster/tests/quickle.R
aster/tests/reaster.R
aster/tests/nzp.R
aster/tests/reaster-warn.R
aster/tests/pickle.R
aster/tests/formula.R
aster/tests/predict.R
aster/tests/famtnb.R
aster/tests/mlogl-unco.R
aster/tests/reaster1.R
aster/tests/ktp.R
aster/tests/foobar.Rdata
aster/tests/cache.R
aster/tests/raster.R
aster/tests/matops.R
aster/tests/mlogl-cond.R
aster/tests/ktnb.R
aster/tests/famber.R
aster/tests/chk.R
aster/tests/famnegbin.R
aster/tests/penmlogl.R
aster/tests/foobar.R
aster/tests/trans.R
aster/tests/newpickle.R
aster/tests/famnorloc.R
aster/src
aster/src/Makevars
aster/src/astchk.c
aster/src/asttrans9.c
aster/src/astderiv.c
aster/src/astfam.c
aster/src/astsim.c
aster/src/asttrans6.c
aster/src/asttrans7.c
aster/src/raster.c
aster/src/astderiv4.c
aster/src/rraster.h
aster/src/aster.h
aster/src/raster.h
aster/src/validtrips.c
aster/src/astderiv3.c
aster/src/asttrans5.c
aster/src/asttrans2.c
aster/src/astcond.c
aster/src/matops.c
aster/src/astorig.c
aster/src/init.c
aster/src/astderiv2.c
aster/src/vatops.c
aster/src/astfish.c
aster/src/astunco.c
aster/src/asttrans8.c
aster/src/asttrans.c
aster/NAMESPACE
aster/data
aster/data/echinacea.txt.gz
aster/data/oats.rda
aster/data/echin2.rda
aster/data/radish.rda
aster/data/sim.rda
aster/data/chamae.rda
aster/data/chamae2.rda
aster/data/chamae3.rda
aster/data/aphid.rda
aster/R
aster/R/anova.R
aster/R/mlogl.R
aster/R/rktnb.R
aster/R/aster.R
aster/R/quickle.R
aster/R/is.zero.R
aster/R/pickle3.R
aster/R/reaster.R
aster/R/pickle.R
aster/R/families.R
aster/R/raster.R
aster/R/rktp.R
aster/R/famfun.R
aster/R/penmlogl.R
aster/R/predict.aster.R
aster/R/transform.R
aster/R/newpickle.R
aster/vignettes
aster/vignettes/re.Rnw
aster/vignettes/trunc.Rnw
aster/vignettes/tutor.Rnw
aster/MD5
aster/build
aster/build/vignette.rds
aster/DESCRIPTION
aster/man
aster/man/transform.Rd
aster/man/aphid.Rd
aster/man/anova.asterOrReaster.Rd
aster/man/truncated.Rd
aster/man/families.Rd
aster/man/chamae3.Rd
aster/man/radish.Rd
aster/man/summary.reaster.Rd
aster/man/echin2.Rd
aster/man/quickle.Rd
aster/man/oats.Rd
aster/man/penmlogl.Rd
aster/man/echinacea.Rd
aster/man/chamae.Rd
aster/man/chamae2.Rd
aster/man/mlogl.Rd
aster/man/pickle.Rd
aster/man/newpickle.Rd
aster/man/raster.Rd
aster/man/summary.aster.Rd
aster/man/reaster.Rd
aster/man/predict.aster.Rd
aster/man/aster.Rd
aster/man/sim.Rd
aster/.Rinstignore
aster/LICENSE
aster/CHANGES