R/data.R

In autoGO: Auto-GO: Reproducible, Robust and High Quality Ontology Enrichment Visualizations

#' Example comparison data.
#'
#' It is the comparison table needed by DESeq2, constituted by the
#' column *treatment* and by the column *control*.
#'
#' @format A data frame with 6 rows and 2 variable:
"comparisons"

#' Example raw count data.
#'
#' Genes as rows and samples as columns.
#'
#' @format A data frame with 29744 rows and 19 variable:
"counts"

#' Example group data.
#'
#' It is the sample information table needed by DESeq2, constituted by the
#' column *sample*, including sample barcodes and by the column *group*
#' including the condition to which each sample belongs.
#'
#' @format A data frame with 18 rows and 2 variable:
"groups"