Man pages for bPeaks
bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes
| baseLineCalc | Function to calculate the average number of reads mapped on... |
| bPeaksAnalysis | Function to run the entire bPeaks procedure |
| bPeaks-package | bPeaks: an intuitive peak-calling strategy to detect... |
| dataPDR1 | ChIP-seq results (IP and control samples) obtained with the... |
| dataReading | Function to import sequencing results in R |
| dataSmoothing | Function to smooth sequencing coverage along a chromosome |
| peakDetection | Peak calling method, i. e. identification of genomic regions... |
| peakDrawing | Function to draw graphical representations of genomic regions... |
| peakLocation | Function to locate detected basic peaks (bPeaks) according to... |
| yeastCDS | Annotations of CDS for different yeast species |
