giveOcc: Input occurrence data

In bRacatus: A Method to Estimate the Accuracy and Biogeographical Status of Georeferenced Biological Data

Input occurrence data

Description

Prepares user provided georeferenced biological data for the models

Usage

giveOcc(
  occ_data,
  species = "species",
  longitude = "longitude",
  latitude = "latitude"
)

Arguments

occ_data	table containing latitude and longitude
species	col.name containing the species information
longitude	col.name containing the longitude information
latitude	col.name containing the latitude information

Value

This function standardises the user provided georeferenced biological data to be fed into the models.

Examples

# Create a data.frame containing species names and coordinates

test_data <- data.frame(sps=rep("Equus acephalus",10),
             lon=c(-43.2,-58.4,-56,-44,-54.5,-57.4,-60.1,-68.5,-71.3,-47.5),
             lat=c(-22.9,-34.6,-34.8,-20,-25.5,-25.2,-3,-32.5,-41.1,-15.5),
             gender=rep("female",10),head_size=rep("headless individual"))

sps_occurrence <- giveOcc(test_data,"sps","lon","lat")

bRacatus documentation built on May 29, 2024, 6:01 a.m.